RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FAM160A1Q05DH4 1040 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 STK38Q15208 465 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 PTPAQ15257 358 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 SAFBQ15424 915 aaKnown RBP eCLIP6.44□□□□□ -1.38
NEK3-211ENST00000629912 SF3A1Q15459 793 aaKnown RBP6.44□□□□□ -1.38
NEK3-211ENST00000629912 AXDND1Q5T1B0 1012 aaPredicted RBP6.44□□□□□ -1.38
NEK3-211ENST00000629912 STYK1Q6J9G0 422 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 RCSD1Q6JBY9 416 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 CCDC73Q6ZRK6 1079 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 AMOTL1Q8IY63 956 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 CCDC144CPQ8IYA2 1237 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 FMR1NBQ8N0W7 255 aaPredicted RBP6.44□□□□□ -1.38
NEK3-211ENST00000629912 MPNDQ8N594 471 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 TRIM44Q96DX7 344 aaPredicted RBP6.44□□□□□ -1.38
NEK3-211ENST00000629912 TIGD1Q96MW7 591 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 AIFM3Q96NN9 605 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 MYL10Q9BUA6 226 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 ZC3H12CQ9C0D7 883 aaKnown RBP6.44□□□□□ -1.38
NEK3-211ENST00000629912 ZNF287Q9HBT7 754 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 GJB4Q9NTQ9 266 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 MYH1P12882 1939 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 CUTAO60888 179 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 PRDM1O75626 825 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 MMP10P09238 476 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 XBP1P17861 261 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 GUCY1A2P33402 732 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 NOVP48745 357 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 GNAQP50148 359 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 RHBDL3P58872 404 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 FKBP1AP62942 108 aaKnown RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 TFAP4Q01664 338 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 AKAP17AQ02040 695 aaKnown RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 TYRO3Q06418 890 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 DIXDC1Q155Q3 683 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 PKN1Q16512 942 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 CAMK4Q16566 473 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 RILPL1Q5EBL4 403 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 SASS6Q6UVJ0 657 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 HHIPL2Q6UWX4 724 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 TMTC3Q6ZXV5 915 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 SLC51AQ86UW1 340 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 NOSTRINQ8IVI9 506 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 ELOA2Q8IYF1 753 aaPredicted RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 ZNF444Q8N0Y2 327 aaPredicted RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 FAM177A1Q8N128 213 aaPredicted RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 STK11IPQ8N1F8 1099 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 JMYQ8N9B5 988 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 FSIP1Q8NA03 581 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 RNF214Q8ND24 703 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 TGFBRAP1Q8WUH2 860 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 MRPS27Q92552 414 aaKnown RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 GPR101Q96P66 508 aaPredicted RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 EYA3Q99504 573 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 FTOQ9C0B1 505 aaKnown RBP eCLIP6.43□□□□□ -1.38
NEK3-211ENST00000629912 TMX4Q9H1E5 349 aaPredicted RBP6.43□□□□□ -1.38
NEK3-211ENST00000629912 GOLPH3LQ9H4A5 285 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 MKNK2Q9HBH9 465 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 IL17RBQ9NRM6 502 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 JAG2Q9Y219 1238 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 FOCADQ5VW36 1801 aa6.43□□□□□ -1.38
NEK3-211ENST00000629912 QSER1Q2KHR3 1735 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 TNS1Q9HBL0 1735 aaKnown RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 TSPY2A6NKD2 308 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 ESPNB1AK53 854 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 BTBD18B2RXH4 712 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 H0YIN7 160 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 KINO60870 393 aaKnown RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 WDHD1O75717 1129 aaPredicted RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 RASA1P20936 1047 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 SMARCA1P28370 1054 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 KIF5BP33176 963 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 BTDP43251 543 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 CDK8P49336 464 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 TOB1P50616 345 aaPredicted RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 GTF2IP78347 998 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 HDLBPQ00341 1268 aaKnown RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 EVX2Q03828 476 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 GNL2Q13823 731 aaKnown RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 SLC15A2Q16348 729 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 TPRNQ4KMQ1 711 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 FAM47AQ5JRC9 791 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 MFSD14BQ5SR56 506 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 CC2D2BQ6DHV5 1058 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 DPP8Q6V1X1 898 aaPredicted RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 C16orf86Q6ZW13 317 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 PODNQ7Z5L7 613 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 DIS3L2Q8IYB7 885 aaKnown RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 TEX11Q8IYF3 940 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 SRBD1Q8N5C6 995 aaKnown RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 ZNF579Q8NAF0 562 aaKnown RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 NEDD1Q8NHV4 660 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 CTCFLQ8NI51 663 aaPredicted RBP6.42□□□□□ -1.38
NEK3-211ENST00000629912 FAM200AQ8TCP9 573 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 CAMKK2Q96RR4 588 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 LZTS2Q9BRK4 669 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 CCDC39Q9UFE4 941 aa6.42□□□□□ -1.38
NEK3-211ENST00000629912 TAOK2Q9UL54 1235 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms