RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
CCDC163-208ENST00000629670 TTC6Q86TZ1 520 aa13.6□□□□□ -0.23
CCDC163-208ENST00000629670 METTL16Q86W50 562 aaKnown RBP13.6□□□□□ -0.23
CCDC163-208ENST00000629670 GPRC5AQ8NFJ5 357 aa13.6□□□□□ -0.23
CCDC163-208ENST00000629670 EAF2Q96CJ1 260 aaPredicted RBP13.6□□□□□ -0.23
CCDC163-208ENST00000629670 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
CCDC163-208ENST00000629670 MORF4L1Q9UBU8 362 aa13.6□□□□□ -0.23
CCDC163-208ENST00000629670 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
CCDC163-208ENST00000629670 EVI5O60447 810 aa13.59□□□□□ -0.23
CCDC163-208ENST00000629670 GDF11O95390 407 aa13.59□□□□□ -0.23
CCDC163-208ENST00000629670 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC163-208ENST00000629670 DYNLL1P63167 89 aaKnown RBP13.59□□□□□ -0.23
CCDC163-208ENST00000629670 PDE3AQ14432 1141 aa13.59□□□□□ -0.23
CCDC163-208ENST00000629670 TTF1Q15361 905 aaPredicted RBP13.59□□□□□ -0.23
CCDC163-208ENST00000629670 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
CCDC163-208ENST00000629670 AACSQ86V21 672 aa13.59□□□□□ -0.23
CCDC163-208ENST00000629670 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
CCDC163-208ENST00000629670 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
CCDC163-208ENST00000629670 HMX1Q9NP08 348 aaPredicted RBP13.59□□□□□ -0.23
CCDC163-208ENST00000629670 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
CCDC163-208ENST00000629670 MGAMO43451 1857 aa13.59□□□□□ -0.23
CCDC163-208ENST00000629670 CEP290O15078 2479 aa13.58□□□□□ -0.23
CCDC163-208ENST00000629670 PHIPQ8WWQ0 1821 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 RLBP1P12271 317 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 MAPK4P31152 587 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 HERVK_113P62684 666 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 CEP85Q6P2H3 762 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 TRMT44Q8IYL2 757 aaKnown RBP13.58□□□□□ -0.24
CCDC163-208ENST00000629670 MIGA1Q8NAN2 632 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 SOCS4Q8WXH5 440 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 FEZ1Q99689 392 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC163-208ENST00000629670 CABP5Q9NP86 173 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
CCDC163-208ENST00000629670 SERPINB13Q9UIV8 391 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 RPTORQ8N122 1335 aa13.58□□□□□ -0.24
CCDC163-208ENST00000629670 PTPRFP10586 1907 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 HMMRO75330 724 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 GH2P01242 217 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 USP14P54578 494 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 MIER1Q8N108 512 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 CLASRPQ8N2M8 674 aaKnown RBP13.57□□□□□ -0.24
CCDC163-208ENST00000629670 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 EHD4Q9H223 541 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
CCDC163-208ENST00000629670 DNAJC18Q9H819 358 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 GJD2Q9UKL4 321 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
CCDC163-208ENST00000629670 MAST2Q6P0Q8 1798 aa13.56□□□□□ -0.24
CCDC163-208ENST00000629670 GLRX3O76003 335 aaKnown RBP13.56□□□□□ -0.24
CCDC163-208ENST00000629670 POLR3DP05423 398 aaPredicted RBP13.56□□□□□ -0.24
CCDC163-208ENST00000629670 CYP2B6P20813 491 aa13.56□□□□□ -0.24
CCDC163-208ENST00000629670 CCNA1P78396 465 aa13.56□□□□□ -0.24
CCDC163-208ENST00000629670 RAB3GAP1Q15042 981 aa13.56□□□□□ -0.24
CCDC163-208ENST00000629670 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
CCDC163-208ENST00000629670 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
CCDC163-208ENST00000629670 PAWRQ96IZ0 340 aaKnown RBP13.56□□□□□ -0.24
CCDC163-208ENST00000629670 PAGR1Q9BTK6 254 aa13.56□□□□□ -0.24
CCDC163-208ENST00000629670 LOC285556D6RIA3 1793 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 MAGEB6P1A0A0J9YX57 407 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
CCDC163-208ENST00000629670 XRCC5P13010 732 aaKnown RBP13.55□□□□□ -0.24
CCDC163-208ENST00000629670 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 ERVK-24P63145 666 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 JAG1P78504 1218 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 ABCB5Q2M3G0 1257 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 TATDN1Q6P1N9 297 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
CCDC163-208ENST00000629670 PANK1Q8TE04 598 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 KIF1BPQ96EK5 621 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 CRNKL1Q9BZJ0 848 aaKnown RBP13.55□□□□□ -0.24
CCDC163-208ENST00000629670 EMILIN3Q9NT22 766 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
CCDC163-208ENST00000629670 ZBED9Q6R2W3 1325 aa13.55□□□□□ -0.24
CCDC163-208ENST00000629670 ZKSCAN1P17029 563 aaPredicted RBP13.54□□□□□ -0.24
CCDC163-208ENST00000629670 RGS2P41220 211 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 ZYXQ15942 572 aaKnown RBP13.54□□□□□ -0.24
CCDC163-208ENST00000629670 SLC9C2Q5TAH2 1124 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 RHPN1Q8TCX5 695 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 ANTXR1Q9H6X2 564 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 RBPJLQ9UBG7 517 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 NDUFB9Q9Y6M9 179 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 ATAD5Q96QE3 1844 aa13.54□□□□□ -0.24
CCDC163-208ENST00000629670 APBB1O00213 710 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms