RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 NCOA5Q9HCD5 579 aaKnown RBP13.07□□□□□ -0.32
SHPRH-211ENST00000629427 USP21Q9UK80 565 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
SHPRH-211ENST00000629427 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 AFAP1L2Q8N4X5 818 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 TACC3Q9Y6A5 838 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 PDE6BP35913 854 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 ANO1Q5XXA6 986 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 RPUSD2Q8IZ73 545 aaKnown RBP13.07□□□□□ -0.32
SHPRH-211ENST00000629427 KCNH3Q9ULD8 1083 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 TUBB4AP04350 444 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 BCRP11274 1271 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 ARHGEF16Q5VV41 709 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 PHKBQ93100 1093 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 MED10Q9BTT4 135 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHPRH-211ENST00000629427 PAK1Q13153 545 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-211ENST00000629427 CNGA1P29973 690 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 OTUD6AQ7L8S5 288 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 SORBS3O60504 671 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 FAM160A1Q05DH4 1040 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 TRIM14Q14142 442 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 TNNI1P19237 187 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 PPP2R3AQ06190 1150 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 LPIN2Q92539 896 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 CEP85LQ5SZL2 805 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 FYB2Q5VWT5 728 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 HDXQ7Z353 690 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHPRH-211ENST00000629427 CD19P15391 556 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 SPATA5Q8NB90 893 aa13.06□□□□□ -0.32
SHPRH-211ENST00000629427 FAM170AA1A519 330 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 KCNA6P17658 529 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 GADL1Q6ZQY3 521 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 GLG1Q92896 1179 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 MYO1AQ9UBC5 1043 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 EXOC3O60645 756 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 ARFGAP2Q8N6H7 521 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 TRIM31Q9BZY9 425 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 TTC36A6NLP5 189 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 SDCCAG8Q86SQ7 713 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-211ENST00000629427 NLRX1Q86UT6 975 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 RNF169Q8NCN4 708 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 INTS4Q96HW7 963 aaKnown RBP13.05□□□□□ -0.32
SHPRH-211ENST00000629427 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 CACYBPQ9HB71 228 aaKnown RBP13.05□□□□□ -0.32
SHPRH-211ENST00000629427 SLC5A4Q9NY91 659 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 P4HA1P13674 534 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 G2E3Q7L622 706 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 RDH13Q8NBN7 331 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 MROH5Q6ZUA9 1318 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 CCDC89Q8N998 374 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 IBTKQ9P2D0 1353 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-211ENST00000629427 hCG_1642624A0A1W2PR95 340 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 GKAP1Q5VSY0 366 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-211ENST00000629427 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
SHPRH-211ENST00000629427 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 ZNF532Q9HCE3 1301 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 PSMD6Q15008 389 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 FAM227BQ96M60 508 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 NUP58Q9BVL2 599 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
SHPRH-211ENST00000629427 C8orf74Q6P047 294 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 TESPA1A2RU30 521 aaPredicted RBP13.04□□□□□ -0.32
SHPRH-211ENST00000629427 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 NAPGQ99747 312 aaPredicted RBP13.04□□□□□ -0.32
SHPRH-211ENST00000629427 LLPHQ9BRT6 129 aaKnown RBP13.04□□□□□ -0.32
SHPRH-211ENST00000629427 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 RIOK3O14730 519 aaKnown RBP13.04□□□□□ -0.32
SHPRH-211ENST00000629427 GTF2IP78347 998 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 LRWD1Q9UFC0 647 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
SHPRH-211ENST00000629427 MAN1A1P33908 653 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 FAM47AQ5JRC9 791 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 KRT25Q7Z3Z0 450 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 MLXIPQ9HAP2 919 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 SWAP70Q9UH65 585 aa13.04□□□□□ -0.32
SHPRH-211ENST00000629427 GTF2A1P52655 376 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-211ENST00000629427 LACTBP83111 547 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-211ENST00000629427 DDX17Q92841 729 aaKnown RBP13.03□□□□□ -0.32
SHPRH-211ENST00000629427 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 NDUFB9Q9Y6M9 179 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms