RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 SLC22A31A6NKX4 558 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 GNAT3A8MTJ3 354 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 IGF2BP3O00425 579 aaKnown RBP eCLIP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 TCERG1O14776 1098 aaKnown RBP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 MATN3O15232 486 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 PRICKLE3O43900 615 aaPredicted RBP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 HSP90B1P14625 803 aaKnown RBP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 MPSTP25325 297 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 EPHB3P54753 998 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 MTMR3Q13615 1198 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 SPATS1Q496A3 300 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 NPM2Q86SE8 214 aaKnown RBP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 IPO4Q8TEX9 1081 aaKnown RBP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 PMEPA1Q969W9 287 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 POLR3GLQ9BT43 218 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 GTF2IRD1Q9UHL9 959 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 BRPF3Q9ULD4 1205 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 NAP1L2Q9ULW6 460 aaPredicted RBP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 AMOTL2Q9Y2J4 779 aa2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 WRNQ14191 1432 aaPredicted RBP eCLIP2.65□□□□□ -1.99
SPTAN1-216ENST00000629047 SASH1O94885 1247 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 FSHBP01225 129 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 HPXP02790 462 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 HMGB1P09429 215 aaKnown RBP2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 UBTFP17480 764 aaKnown RBP2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 MZF1P28698 734 aaPredicted RBP2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 EIF1AXP47813 144 aaKnown RBP2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 HNRNPUQ00839 825 aaKnown RBP eCLIP2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 PLP2Q04941 152 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 RTP5Q14D33 572 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 SWI5Q1ZZU3 235 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 PPM1JQ5JR12 505 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 MPRIPQ6WCQ1 1025 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 IRF2BP1Q8IU81 584 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 NPAS4Q8IUM7 802 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 CLUAP1Q96AJ1 413 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 MENTQ9BUN1 341 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 ADAMTS10Q9H324 1103 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 BCCIPQ9P287 314 aaKnown RBP eCLIP2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 ST14Q9Y5Y6 855 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 SYNGAP1Q96PV0 1343 aa2.64□□□□□ -1.99
SPTAN1-216ENST00000629047 GOLGA6L3A6NEY3 463 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 GRIN3BO60391 1043 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 EFEMP2O95967 443 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 ESR1P03372 595 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 SLPIP03973 132 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 PTMAP06454 111 aaKnown RBP2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 GSTP1P09211 210 aaKnown RBP2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 RAC2P15153 192 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 AFF3P51826 1226 aaKnown RBP2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 BECN1Q14457 450 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 ZNF385BQ569K4 471 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 SMAP1Q8IYB5 467 aaPredicted RBP2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 FNBP4Q8N3X1 1017 aaPredicted RBP2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 DACT3Q96B18 629 aaPredicted RBP2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 FOXQ1Q9C009 403 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 ZFYVE28Q9HCC9 887 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 PRDM5Q9NQX1 630 aaPredicted RBP2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 TMEM59LQ9UK28 342 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 MYRFQ9Y2G1 1151 aa2.63□□□□□ -1.99
SPTAN1-216ENST00000629047 FAM155AB1AL88 458 aaPredicted RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 SEMA7AO75326 666 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 SLITRK5O94991 958 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 APPP05067 770 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 RFX1P22670 979 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 AP3B2Q13367 1082 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 NOM1Q5C9Z4 860 aaKnown RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 ZC3H12AQ5D1E8 599 aaKnown RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 CRB2Q5IJ48 1285 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 DNTTIP2Q5QJE6 756 aaKnown RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 AXDND1Q5T1B0 1012 aaPredicted RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 C14orf37Q86TY3 774 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 PDZD3Q86UT5 571 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 FTSJ3Q8IY81 847 aaKnown RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 MFSD4AQ8N468 514 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 RNF214Q8ND24 703 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 KCNB2Q92953 911 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 UBE2FQ969M7 185 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 CALR3Q96L12 384 aaKnown RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 GPR20Q99678 358 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 TSPYL1Q9H0U9 437 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 ZFYVE1Q9HBF4 777 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 ZSWIM5Q9P217 1185 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 ISY1Q9ULR0 285 aaKnown RBP2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 CAPN6Q9Y6Q1 641 aa2.62□□□□□ -1.99
SPTAN1-216ENST00000629047 TEX51A0A1B0GUA7 166 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 RFXAPO00287 272 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 CLGNO14967 610 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 LETM1O95202 739 aaPredicted RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 SLFN14P0C7P3 912 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 PCSK2P16519 638 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 ITPKAP23677 461 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 MSNP26038 577 aaKnown RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 IRX3P78415 501 aaPredicted RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 DDX10Q13206 875 aaKnown RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 UTP14CQ5TAP6 766 aaKnown RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 TMEM164Q5U3C3 297 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 TMEM132EQ6IEE7 984 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 B4GALNT3Q6L9W6 998 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms