RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 SDSP20132 328 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 CCL15Q16663 113 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 SLC44A5Q8NCS7 719 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 HELLSQ9NRZ9 838 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-248ENST00000628496 LBX1P52954 281 aa16.27■□□□□ 0.2
SOX2-OT-248ENST00000628496 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-248ENST00000628496 LAMB1P07942 1786 aa16.27■□□□□ 0.2
SOX2-OT-248ENST00000628496 DOCK1Q14185 1865 aa16.27■□□□□ 0.19
SOX2-OT-248ENST00000628496 MYH1P12882 1939 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 CXCL11O14625 94 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 APPP05067 770 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 CETPP11597 493 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 MOGSQ13724 837 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 ZNF589Q86UQ0 364 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
SOX2-OT-248ENST00000628496 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 USP17L5A8MUK1 530 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 GH2P01242 217 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 ASNSP08243 561 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 TDO2P48775 406 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 FAM43AQ8N2R8 423 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
SOX2-OT-248ENST00000628496 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 ALDH1A1P00352 501 aa16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 CDK8P49336 464 aa16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 GINM1Q9NU53 330 aa16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
SOX2-OT-248ENST00000628496 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 SPP2Q13103 211 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 ABCB5Q2M3G0 1257 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 NAPBQ9H115 298 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
SOX2-OT-248ENST00000628496 HIP1O00291 1037 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 CRHR2Q13324 411 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 OTUD7BQ6GQQ9 843 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 WDR18Q9BV38 432 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 IL25Q9H293 177 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
SOX2-OT-248ENST00000628496 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 AKR1B1P15121 316 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 DGKZQ13574 1117 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 MTMR2Q13614 643 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 SEPT2Q15019 361 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 COL13A1Q5TAT6 717 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 STK11IPQ8N1F8 1099 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 PHIPQ8WWQ0 1821 aa16.21■□□□□ 0.19
SOX2-OT-248ENST00000628496 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 MPHOSPH10O00566 681 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 HMGCS2P54868 508 aa16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 PPARAQ07869 468 aa16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 TAF1CQ15572 869 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 ALX1Q15699 326 aa16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 SH3D19Q5HYK7 790 aa16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 FASTKD5Q7L8L6 764 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 ZCCHC17Q9NP64 241 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
SOX2-OT-248ENST00000628496 ATAD5Q96QE3 1844 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 PDHXO00330 501 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 FGAP02671 866 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 RASA1P20936 1047 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 CHMLP26374 656 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 BACE1P56817 501 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 TMEM179Q6ZVK1 233 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
SOX2-OT-248ENST00000628496 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms