RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 GPRC5AQ8NFJ5 357 aa20.83■□□□□ 0.93
TCF4-261ENST00000627784 USP6NLQ92738 828 aa20.83■□□□□ 0.93
TCF4-261ENST00000627784 AS3MTQ9HBK9 375 aa20.83■□□□□ 0.93
TCF4-261ENST00000627784 HERC5Q9UII4 1024 aaKnown RBP20.83■□□□□ 0.93
TCF4-261ENST00000627784 MAP4K4O95819 1239 aaPredicted RBP20.82■□□□□ 0.92
TCF4-261ENST00000627784 MCAMP43121 646 aa20.82■□□□□ 0.92
TCF4-261ENST00000627784 PI4KBQ9UBF8 816 aa20.82■□□□□ 0.92
TCF4-261ENST00000627784 SIPA1L1O43166 1804 aa20.82■□□□□ 0.92
TCF4-261ENST00000627784 AATFQ9NY61 560 aaKnown RBP eCLIP20.81■□□□□ 0.92
TCF4-261ENST00000627784 TMOD4Q9NZQ9 345 aa20.81■□□□□ 0.92
TCF4-261ENST00000627784 SPTBN5Q9NRC6 3674 aaKnown RBP20.81■□□□□ 0.92
TCF4-261ENST00000627784 PRUNE2Q8WUY3 3088 aa20.8■□□□□ 0.92
TCF4-261ENST00000627784 GDF11O95390 407 aa20.8■□□□□ 0.92
TCF4-261ENST00000627784 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
TCF4-261ENST00000627784 ARID4AP29374 1257 aaPredicted RBP20.8■□□□□ 0.92
TCF4-261ENST00000627784 MORN1Q5T089 497 aa20.8■□□□□ 0.92
TCF4-261ENST00000627784 GPR142Q7Z601 462 aa20.8■□□□□ 0.92
TCF4-261ENST00000627784 ADGRA1Q86SQ6 560 aa20.8■□□□□ 0.92
TCF4-261ENST00000627784 MAPKAPK5Q8IW41 473 aa20.8■□□□□ 0.92
TCF4-261ENST00000627784 TRMT2AQ8IZ69 625 aaKnown RBP20.8■□□□□ 0.92
TCF4-261ENST00000627784 SOCS4Q8WXH5 440 aa20.8■□□□□ 0.92
TCF4-261ENST00000627784 COL25A1Q9BXS0 654 aaPredicted RBP20.8■□□□□ 0.92
TCF4-261ENST00000627784 ASNSP08243 561 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 ERVK-9P63128 1117 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 ERVK-24P63145 666 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 GORABQ5T7V8 394 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 TGFBRAP1Q8WUH2 860 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 PAGR1Q9BTK6 254 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 API5Q9BZZ5 524 aaKnown RBP20.79■□□□□ 0.92
TCF4-261ENST00000627784 SNRKQ9NRH2 765 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 EMILIN3Q9NT22 766 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 LRP2BPQ9P2M1 347 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 HDAC5Q9UQL6 1122 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 CDH23Q9H251 3354 aa20.79■□□□□ 0.92
TCF4-261ENST00000627784 USP17L10C9JJH3 530 aa20.78■□□□□ 0.92
TCF4-261ENST00000627784 MAPK4P31152 587 aa20.78■□□□□ 0.92
TCF4-261ENST00000627784 MTX1Q13505 466 aa20.78■□□□□ 0.92
TCF4-261ENST00000627784 METTL16Q86W50 562 aaKnown RBP20.78■□□□□ 0.92
TCF4-261ENST00000627784 GUCD1Q96NT3 240 aa20.78■□□□□ 0.92
TCF4-261ENST00000627784 PALD1Q9ULE6 856 aa20.78■□□□□ 0.92
TCF4-261ENST00000627784 NDUFB9Q9Y6M9 179 aa20.78■□□□□ 0.92
TCF4-261ENST00000627784 C19orf81C9J6K1 198 aa20.77■□□□□ 0.92
TCF4-261ENST00000627784 POTEB2H3BUK9 544 aa20.77■□□□□ 0.92
TCF4-261ENST00000627784 PDE3AQ14432 1141 aa20.77■□□□□ 0.92
TCF4-261ENST00000627784 PLEKHH3Q7Z736 793 aa20.77■□□□□ 0.92
TCF4-261ENST00000627784 DHX36Q9H2U1 1008 aaKnown RBP20.77■□□□□ 0.92
TCF4-261ENST00000627784 FLRT1Q9NZU1 646 aa20.77■□□□□ 0.92
TCF4-261ENST00000627784 FLT1P17948 1338 aa20.77■□□□□ 0.91
TCF4-261ENST00000627784 CNMDO75829 334 aa20.76■□□□□ 0.91
TCF4-261ENST00000627784 RGS2P41220 211 aa20.76■□□□□ 0.91
TCF4-261ENST00000627784 NAA16Q6N069 864 aaPredicted RBP20.76■□□□□ 0.91
TCF4-261ENST00000627784 FAM161BQ96MY7 647 aa20.76■□□□□ 0.91
TCF4-261ENST00000627784 SAP30BPQ9UHR5 308 aaKnown RBP20.76■□□□□ 0.91
TCF4-261ENST00000627784 ZBTB21Q9ULJ3 1066 aa20.76■□□□□ 0.91
TCF4-261ENST00000627784 PNMA6EA0A0J9YXQ4 647 aa20.75■□□□□ 0.91
TCF4-261ENST00000627784 PPP4CP60510 307 aa20.75■□□□□ 0.91
TCF4-261ENST00000627784 FOXP4Q8IVH2 680 aaPredicted RBP20.75■□□□□ 0.91
TCF4-261ENST00000627784 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
TCF4-261ENST00000627784 APBA2Q99767 749 aa20.75■□□□□ 0.91
TCF4-261ENST00000627784 SENP6Q9GZR1 1112 aaPredicted RBP20.75■□□□□ 0.91
TCF4-261ENST00000627784 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.74■□□□□ 0.91
TCF4-261ENST00000627784 CCAR1Q8IX12 1150 aaKnown RBP20.74■□□□□ 0.91
TCF4-261ENST00000627784 CRACR2BQ8N4Y2 399 aaPredicted RBP20.74■□□□□ 0.91
TCF4-261ENST00000627784 TNNQ9UQP3 1299 aa20.74■□□□□ 0.91
TCF4-261ENST00000627784 BAG3O95817 575 aa20.73■□□□□ 0.91
TCF4-261ENST00000627784 GNAI3P08754 354 aa20.73■□□□□ 0.91
TCF4-261ENST00000627784 ATN1P54259 1190 aaPredicted RBP20.73■□□□□ 0.91
TCF4-261ENST00000627784 NOL10Q9BSC4 688 aaKnown RBP20.73■□□□□ 0.91
TCF4-261ENST00000627784 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
TCF4-261ENST00000627784 CYP2E1P05181 493 aaPredicted RBP20.72■□□□□ 0.91
TCF4-261ENST00000627784 UQCRFS1P1P0C7P4 283 aa20.72■□□□□ 0.91
TCF4-261ENST00000627784 RARSP54136 660 aaKnown RBP20.72■□□□□ 0.91
TCF4-261ENST00000627784 DYNLL1P63167 89 aaKnown RBP20.72■□□□□ 0.91
TCF4-261ENST00000627784 MAP2K5Q13163 448 aa20.72■□□□□ 0.91
TCF4-261ENST00000627784 ZYXQ15942 572 aaKnown RBP20.72■□□□□ 0.91
TCF4-261ENST00000627784 USP17L2Q6R6M4 530 aa20.72■□□□□ 0.91
TCF4-261ENST00000627784 EDC3Q96F86 508 aaKnown RBP20.72■□□□□ 0.91
TCF4-261ENST00000627784 GH2P01242 217 aa20.71■□□□□ 0.91
TCF4-261ENST00000627784 G3BP1Q13283 466 aaKnown RBP eCLIP20.71■□□□□ 0.91
TCF4-261ENST00000627784 FAM109BQ6ICB4 259 aaPredicted RBP20.71■□□□□ 0.91
TCF4-261ENST00000627784 DBNDD2Q9BQY9 259 aa20.71■□□□□ 0.91
TCF4-261ENST00000627784 TRIM34Q9BYJ4 488 aa20.71■□□□□ 0.91
TCF4-261ENST00000627784 CDK5RAP2Q96SN8 1893 aa20.71■□□□□ 0.91
TCF4-261ENST00000627784 CT47B1P0C2W7 299 aaPredicted RBP20.7■□□□□ 0.9
TCF4-261ENST00000627784 PLCG2P16885 1265 aa20.7■□□□□ 0.9
TCF4-261ENST00000627784 TRPV1Q8NER1 839 aa20.7■□□□□ 0.9
TCF4-261ENST00000627784 NPLOC4Q8TAT6 608 aa20.7■□□□□ 0.9
TCF4-261ENST00000627784 PIH1D3Q9NQM4 214 aaKnown RBP20.7■□□□□ 0.9
TCF4-261ENST00000627784 GINM1Q9NU53 330 aa20.7■□□□□ 0.9
TCF4-261ENST00000627784 DDX20Q9UHI6 824 aaKnown RBP20.7■□□□□ 0.9
TCF4-261ENST00000627784 RABGAP1Q9Y3P9 1069 aa20.7■□□□□ 0.9
TCF4-261ENST00000627784 PTPREP23469 700 aa20.69■□□□□ 0.9
TCF4-261ENST00000627784 CYP2C19P33261 490 aa20.69■□□□□ 0.9
TCF4-261ENST00000627784 TTC39AQ5SRH9 613 aa20.69■□□□□ 0.9
TCF4-261ENST00000627784 WDR78Q5VTH9 848 aa20.69■□□□□ 0.9
TCF4-261ENST00000627784 ACER1Q8TDN7 264 aa20.69■□□□□ 0.9
TCF4-261ENST00000627784 GTF3C2Q8WUA4 911 aaPredicted RBP20.69■□□□□ 0.9
TCF4-261ENST00000627784 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
TCF4-261ENST00000627784 BTBD7Q9P203 1132 aa20.69■□□□□ 0.9
TCF4-261ENST00000627784 FRMPD3Q5JV73 1810 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms