RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PRC1O43663 620 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 MCM5P33992 734 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 SCNN1DP51172 638 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 ANTXR2P58335 489 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 MFSD6Q6ZSS7 791 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 KIAA0825Q8IV33 1275 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 NKX2-3Q8TAU0 364 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 BRF1Q92994 677 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 INTS4Q96HW7 963 aaKnown RBP11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 TAOK3Q9H2K8 898 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 SH2B1Q9NRF2 756 aaPredicted RBP11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 BAZ2AQ9UIF9 1905 aaKnown RBP11.72□□□□□ -0.53
SOX2-OT-244ENST00000627738 COL4A5P29400 1685 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 SMIM22K7EJ46 135 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 IRF6O14896 467 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 TRIM66O15016 1216 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 CYP2D6P10635 497 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 CRKP46108 304 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 RHBDL3P58872 404 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 ST3GAL1Q11201 340 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 SBK1Q52WX2 424 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 RRP12Q5JTH9 1297 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 CYB5R4Q7L1T6 521 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 MAPKAPK5Q8IW41 473 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 CCDC83Q8IWF9 413 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 TEX11Q8IYF3 940 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 TEKT1Q969V4 418 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 AGXT2Q9BYV1 514 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 KRT23Q9C075 422 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 RNF41Q9H4P4 317 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 CNNM2Q9H8M5 875 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 CWC22Q9HCG8 908 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 TOMM22Q9NS69 142 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 MCM9Q9NXL9 1143 aa11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 ARPP21Q9UBL0 812 aaPredicted RBP11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
SOX2-OT-244ENST00000627738 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.54
SOX2-OT-244ENST00000627738 WDR19Q8NEZ3 1342 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 NFKBIEO00221 500 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 KDM4AO75164 1064 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 RAD17O75943 681 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 APOBRQ0VD83 1088 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 STK3Q13188 491 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 NIM1KQ8IY84 436 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 FBXL16Q8N461 479 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 FER1L6Q2WGJ9 1857 aa11.7□□□□□ -0.54
SOX2-OT-244ENST00000627738 TK2O00142 265 aa11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 PSMD14O00487 310 aa11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 HDLBPQ00341 1268 aaKnown RBP11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 SLC4A8Q2Y0W8 1093 aa11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 APOBEC3HQ6NTF7 200 aaKnown RBP11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 KCTD12Q96CX2 325 aaKnown RBP11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 MRIQ9BWK5 157 aa11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 SAP30BPQ9UHR5 308 aaKnown RBP11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 ZNRF3Q9ULT6 936 aa11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
SOX2-OT-244ENST00000627738 NAV1Q8NEY1 1877 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 FLT1P17948 1338 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 MYO3BQ8WXR4 1341 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 PSME4Q14997 1843 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 SH2B2O14492 632 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 HRO43593 1189 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 SLC3A2P08195 630 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 VIL1P09327 827 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 FGRP09769 529 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 PCP11498 1178 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 RBM5P52756 815 aaKnown RBP eCLIP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 RASSF7Q02833 373 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 C12orf60Q5U649 245 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 JDP2Q8WYK2 163 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 TMEM87BQ96K49 555 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 ZDHHC15Q96MV8 337 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 ADAM33Q9BZ11 813 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 NPDC1Q9NQX5 325 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 ZSWIM5Q9P217 1185 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 SMC3Q9UQE7 1217 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 PCDHAC2Q9Y5I4 1007 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 LAMB1P07942 1786 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
SOX2-OT-244ENST00000627738 IFIT3O14879 490 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 PFKFB2O60825 505 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 PRDM1O75626 825 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 EVCP57679 992 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 PDE4DQ08499 809 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms