RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 TMOD4Q9NZQ9 345 aa31.13■■■□□ 2.57
TCF4-259ENST00000627568 FAM110CQ1W6H9 321 aa31.12■■■□□ 2.57
TCF4-259ENST00000627568 BIN2Q9UBW5 565 aaPredicted RBP31.12■■■□□ 2.57
TCF4-259ENST00000627568 ZBTB21Q9ULJ3 1066 aa31.12■■■□□ 2.57
TCF4-259ENST00000627568 GOLIM4O00461 696 aa31.11■■■□□ 2.57
TCF4-259ENST00000627568 GCLCP48506 637 aaPredicted RBP31.11■■■□□ 2.57
TCF4-259ENST00000627568 BACE1P56817 501 aa31.11■■■□□ 2.57
TCF4-259ENST00000627568 SLC9C2Q5TAH2 1124 aa31.11■■■□□ 2.57
TCF4-259ENST00000627568 MAGEB6P1A0A0J9YX57 407 aa31.1■■■□□ 2.57
TCF4-259ENST00000627568 TTC6Q86TZ1 520 aa31.1■■■□□ 2.57
TCF4-259ENST00000627568 SLAIN1Q8ND83 568 aa31.1■■■□□ 2.57
TCF4-259ENST00000627568 SERPINB13Q9UIV8 391 aa31.1■■■□□ 2.57
TCF4-259ENST00000627568 MKI67P46013 3256 aaKnown RBP31.1■■■□□ 2.57
TCF4-259ENST00000627568 C19orf81C9J6K1 198 aa31.09■■■□□ 2.57
TCF4-259ENST00000627568 PDE6AP16499 860 aa31.09■■■□□ 2.57
TCF4-259ENST00000627568 UBXN2AP68543 259 aa31.09■■■□□ 2.57
TCF4-259ENST00000627568 IRX3P78415 501 aaPredicted RBP31.09■■■□□ 2.57
TCF4-259ENST00000627568 C20orf194Q5TEA3 1177 aa31.09■■■□□ 2.57
TCF4-259ENST00000627568 ASCC2Q9H1I8 757 aaPredicted RBP31.09■■■□□ 2.57
TCF4-259ENST00000627568 EHD4Q9H223 541 aa31.09■■■□□ 2.57
TCF4-259ENST00000627568 GABRQQ9UN88 632 aa31.09■■■□□ 2.57
TCF4-259ENST00000627568 NAV1Q8NEY1 1877 aa31.09■■■□□ 2.57
TCF4-259ENST00000627568 USP17L10C9JJH3 530 aa31.08■■■□□ 2.57
TCF4-259ENST00000627568 JAG1P78504 1218 aa31.08■■■□□ 2.57
TCF4-259ENST00000627568 COA7Q96BR5 231 aa31.08■■■□□ 2.57
TCF4-259ENST00000627568 RIOK1Q9BRS2 568 aaKnown RBP31.08■■■□□ 2.57
TCF4-259ENST00000627568 CRNKL1Q9BZJ0 848 aaKnown RBP31.08■■■□□ 2.57
TCF4-259ENST00000627568 FLT3LGP49771 235 aa31.07■■■□□ 2.56
TCF4-259ENST00000627568 MTFR1Q15390 333 aa31.07■■■□□ 2.56
TCF4-259ENST00000627568 DOCK3Q8IZD9 2030 aa31.07■■■□□ 2.56
TCF4-259ENST00000627568 ZNF532Q9HCE3 1301 aa31.06■■■□□ 2.56
TCF4-259ENST00000627568 SHROOM1Q2M3G4 852 aaPredicted RBP31.06■■■□□ 2.56
TCF4-259ENST00000627568 DDX60LQ5H9U9 1706 aaKnown RBP31.06■■■□□ 2.56
TCF4-259ENST00000627568 ADCY3O60266 1144 aa31.05■■■□□ 2.56
TCF4-259ENST00000627568 GH2P01242 217 aa31.05■■■□□ 2.56
TCF4-259ENST00000627568 NKX2-3Q8TAU0 364 aa31.05■■■□□ 2.56
TCF4-259ENST00000627568 LRRCC1Q9C099 1032 aa31.05■■■□□ 2.56
TCF4-259ENST00000627568 PAG1Q9NWQ8 432 aa31.05■■■□□ 2.56
TCF4-259ENST00000627568 POLR3DP05423 398 aaPredicted RBP31.04■■■□□ 2.56
TCF4-259ENST00000627568 TATDN1Q6P1N9 297 aa31.04■■■□□ 2.56
TCF4-259ENST00000627568 BOLA2Q9H3K6 86 aa31.04■■■□□ 2.56
TCF4-259ENST00000627568 CCL5P13501 91 aa31.03■■■□□ 2.56
TCF4-259ENST00000627568 ATP5JP18859 108 aa31.03■■■□□ 2.56
TCF4-259ENST00000627568 HOXA7P31268 230 aaPredicted RBP31.03■■■□□ 2.56
TCF4-259ENST00000627568 IRF5Q13568 498 aa31.03■■■□□ 2.56
TCF4-259ENST00000627568 FEZ1Q99689 392 aa31.03■■■□□ 2.56
TCF4-259ENST00000627568 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.03■■■□□ 2.561e-6■■■■□ 20.5
TCF4-259ENST00000627568 TAOK2Q9UL54 1235 aa31.03■■■□□ 2.56
TCF4-259ENST00000627568 CERKLQ49MI3 558 aaPredicted RBP31.02■■■□□ 2.56
TCF4-259ENST00000627568 PXYLP1Q8TE99 480 aa31.02■■■□□ 2.56
TCF4-259ENST00000627568 EDC3Q96F86 508 aaKnown RBP31.02■■■□□ 2.56
TCF4-259ENST00000627568 RNF208Q9H0X6 261 aa31.02■■■□□ 2.56
TCF4-259ENST00000627568 TCRBV5S4A2TA0A5A2 114 aa31.01■■■□□ 2.55
TCF4-259ENST00000627568 CABP5Q9NP86 173 aa31.01■■■□□ 2.55
TCF4-259ENST00000627568 MCM9Q9NXL9 1143 aa31.01■■■□□ 2.55
TCF4-259ENST00000627568 SLC34A2O95436 690 aa31■■■□□ 2.55
TCF4-259ENST00000627568 GJB1P08034 283 aa31■■■□□ 2.55
TCF4-259ENST00000627568 ELNP15502 786 aa31■■■□□ 2.55
TCF4-259ENST00000627568 PLCD1P51178 756 aa31■■■□□ 2.55
TCF4-259ENST00000627568 RAB3GAP1Q15042 981 aa31■■■□□ 2.55
TCF4-259ENST00000627568 ABCB5Q2M3G0 1257 aa31■■■□□ 2.55
TCF4-259ENST00000627568 USP17L2Q6R6M4 530 aa31■■■□□ 2.55
TCF4-259ENST00000627568 MYH7P12883 1935 aa31■■■□□ 2.55
TCF4-259ENST00000627568 LCORLQ8N3X6 602 aa30.99■■■□□ 2.55
TCF4-259ENST00000627568 HAUS7Q99871 368 aa30.99■■■□□ 2.55
TCF4-259ENST00000627568 MORF4L1Q9UBU8 362 aa30.99■■■□□ 2.55
TCF4-259ENST00000627568 INHAP05111 366 aa30.98■■■□□ 2.55
TCF4-259ENST00000627568 ADD2P35612 726 aa30.98■■■□□ 2.55
TCF4-259ENST00000627568 HERVK_113P62684 666 aa30.98■■■□□ 2.55
TCF4-259ENST00000627568 GTF3C2Q8WUA4 911 aaPredicted RBP30.98■■■□□ 2.55
TCF4-259ENST00000627568 SDR42E1Q8WUS8 393 aa30.98■■■□□ 2.55
TCF4-259ENST00000627568 GCC1Q96CN9 775 aa30.98■■■□□ 2.55
TCF4-259ENST00000627568 SHMT1P34896 483 aa30.97■■■□□ 2.55
TCF4-259ENST00000627568 GJA8P48165 433 aa30.97■■■□□ 2.55
TCF4-259ENST00000627568 USP14P54578 494 aa30.97■■■□□ 2.55
TCF4-259ENST00000627568 ZYXQ15942 572 aaKnown RBP30.97■■■□□ 2.55
TCF4-259ENST00000627568 SHISA4Q96DD7 197 aa30.97■■■□□ 2.55
TCF4-259ENST00000627568 P2RX7Q99572 595 aaKnown RBP30.97■■■□□ 2.55
TCF4-259ENST00000627568 EMILIN3Q9NT22 766 aa30.97■■■□□ 2.55
TCF4-259ENST00000627568 SMARCA5O60264 1052 aaPredicted RBP30.96■■■□□ 2.55
TCF4-259ENST00000627568 UNC93B1Q9H1C4 597 aa30.96■■■□□ 2.55
TCF4-259ENST00000627568 ARMT1Q9H993 441 aa30.96■■■□□ 2.55
TCF4-259ENST00000627568 DCP1AQ9NPI6 582 aaPredicted RBP30.96■■■□□ 2.55
TCF4-259ENST00000627568 GPRC5AQ8NFJ5 357 aa30.95■■■□□ 2.55
TCF4-259ENST00000627568 C12orf42Q96LP6 360 aa30.95■■■□□ 2.55
TCF4-259ENST00000627568 MYH8P13535 1937 aa30.94■■■□□ 2.54
TCF4-259ENST00000627568 MBD4O95243 580 aa30.94■■■□□ 2.54
TCF4-259ENST00000627568 GABPAQ06546 454 aa30.94■■■□□ 2.54
TCF4-259ENST00000627568 ZSCAN25Q6NSZ9 544 aa30.94■■■□□ 2.54
TCF4-259ENST00000627568 CCAR1Q8IX12 1150 aaKnown RBP30.93■■■□□ 2.54
TCF4-259ENST00000627568 U2AF1L4Q8WU68 220 aaKnown RBP30.93■■■□□ 2.54
TCF4-259ENST00000627568 GPATCH3Q96I76 525 aa30.93■■■□□ 2.54
TCF4-259ENST00000627568 KIAA1683Q9H0B3 1180 aa30.93■■■□□ 2.54
TCF4-259ENST00000627568 BAZ2AQ9UIF9 1905 aaKnown RBP30.92■■■□□ 2.54
TCF4-259ENST00000627568 MPHOSPH10O00566 681 aaKnown RBP30.92■■■□□ 2.54
TCF4-259ENST00000627568 AMOTL1Q8IY63 956 aa30.92■■■□□ 2.54
TCF4-259ENST00000627568 DDRGK1Q96HY6 314 aa30.92■■■□□ 2.54
TCF4-259ENST00000627568 PAGR1Q9BTK6 254 aa30.92■■■□□ 2.54
TCF4-259ENST00000627568 ATP8A2Q9NTI2 1148 aa30.92■■■□□ 2.54
TCF4-259ENST00000627568 USP17L15C9J2P7 530 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms