RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 MAP3K10Q02779 954 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 EXOSC9Q06265 439 aaKnown RBP10.7□□□□□ -0.7
TCF4-258ENST00000627320 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
TCF4-258ENST00000627320 ADGRE1Q14246 886 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 PDE3AQ14432 1141 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 MORN1Q5T089 497 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 GPR142Q7Z601 462 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 PROCA1Q8NCQ7 364 aaPredicted RBP10.7□□□□□ -0.7
TCF4-258ENST00000627320 NPLOC4Q8TAT6 608 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 SYMPKQ92797 1274 aaKnown RBP10.7□□□□□ -0.7
TCF4-258ENST00000627320 NUDT12Q9BQG2 462 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 PNMA3Q9UL41 463 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
TCF4-258ENST00000627320 A0A0G2JMZ2 1700 aa10.7□□□□□ -0.7
TCF4-258ENST00000627320 GAKO14976 1311 aa10.69□□□□□ -0.7
TCF4-258ENST00000627320 CNMDO75829 334 aa10.69□□□□□ -0.7
TCF4-258ENST00000627320 LDHBP07195 334 aaKnown RBP10.69□□□□□ -0.7
TCF4-258ENST00000627320 ZEB1P37275 1124 aaPredicted RBP10.69□□□□□ -0.7
TCF4-258ENST00000627320 HERVK_113P62684 666 aa10.69□□□□□ -0.7
TCF4-258ENST00000627320 SMAD3P84022 425 aaKnown RBP10.69□□□□□ -0.7
TCF4-258ENST00000627320 ZNF280CQ8ND82 737 aa10.69□□□□□ -0.7
TCF4-258ENST00000627320 KHSRPQ92945 711 aaKnown RBP eCLIP10.69□□□□□ -0.72e-6■■■□□ 17.1
TCF4-258ENST00000627320 PRDM12Q9H4Q4 367 aa10.69□□□□□ -0.7
TCF4-258ENST00000627320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.69□□□□□ -0.7
TCF4-258ENST00000627320 ENTPD3O75355 529 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 GDF11O95390 407 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 DNAJB2P25686 324 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 RFX5P48382 616 aaPredicted RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 GCLCP48506 637 aaPredicted RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 RHBDL3P58872 404 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 CALD1Q05682 793 aaKnown RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 PUM3Q15397 648 aaKnown RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 RABL6Q3YEC7 729 aaPredicted RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 SLC39A5Q6ZMH5 540 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 ATG9AQ7Z3C6 839 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 WDR66Q8TBY9 1149 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 RNPC3Q96LT9 517 aaKnown RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 UHRF1Q96T88 793 aaPredicted RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 APBA2Q99767 749 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 SIL1Q9H173 461 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 DNAJC18Q9H819 358 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 DDX20Q9UHI6 824 aaKnown RBP10.68□□□□□ -0.7
TCF4-258ENST00000627320 SUGT1Q9Y2Z0 365 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 ZNF236Q9UL36 1845 aa10.68□□□□□ -0.7
TCF4-258ENST00000627320 MCM3APO60318 1980 aa10.67□□□□□ -0.7
TCF4-258ENST00000627320 IFIT1P09914 478 aaKnown RBP10.67□□□□□ -0.7
TCF4-258ENST00000627320 CAPN2P17655 700 aa10.67□□□□□ -0.7
TCF4-258ENST00000627320 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
TCF4-258ENST00000627320 ERVK-24P63145 666 aa10.67□□□□□ -0.7
TCF4-258ENST00000627320 IRX3P78415 501 aaPredicted RBP10.67□□□□□ -0.7
TCF4-258ENST00000627320 TFF2Q03403 129 aa10.67□□□□□ -0.7
TCF4-258ENST00000627320 ZYXQ15942 572 aaKnown RBP10.67□□□□□ -0.7
TCF4-258ENST00000627320 PRAMEF19Q5SWL8 479 aa10.67□□□□□ -0.7
TCF4-258ENST00000627320 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
TCF4-258ENST00000627320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.67□□□□□ -0.7
TCF4-258ENST00000627320 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
TCF4-258ENST00000627320 MUC6Q6W4X9 2439 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 FAM86C2PA6NEL3 165 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 XRCC5P13010 732 aaKnown RBP10.66□□□□□ -0.7
TCF4-258ENST00000627320 CAP2P40123 477 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 RGS2P41220 211 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 WDR78Q5VTH9 848 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 PLEKHH3Q7Z736 793 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 GPRC5AQ8NFJ5 357 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 SOCS4Q8WXH5 440 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 LENG1Q96BZ8 264 aaPredicted RBP10.66□□□□□ -0.7
TCF4-258ENST00000627320 ASB2Q96Q27 587 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 SRCIN1Q9C0H9 1055 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 EPHX3Q9H6B9 360 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 ABCF2Q9UG63 623 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 PRKAG2Q9UGJ0 569 aa10.66□□□□□ -0.7
TCF4-258ENST00000627320 MROH7-TTC4A0A0A0MT08 1334 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 USP17L5A8MUK1 530 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 SLC5A1P13866 664 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 ADCYAP1R1P41586 468 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 KCNQ1P51787 676 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 MAP2K5Q13163 448 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 RASGRF1Q13972 1273 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 ZNF576Q9H609 170 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 THEGQ9P2T0 379 aa10.65□□□□□ -0.7
TCF4-258ENST00000627320 UTYO14607 1347 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 PRRC2BQ5JSZ5 2229 aaKnown RBP10.64□□□□□ -0.71
TCF4-258ENST00000627320 SCN5AQ14524 2016 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 EYA2O00167 538 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 DNM1LO00429 736 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 ALDH1L1O75891 902 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 CYBAP13498 195 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
TCF4-258ENST00000627320 TLE2Q04725 743 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 ATP2B3Q16720 1220 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 ALYREFQ86V81 257 aaKnown RBP10.64□□□□□ -0.71
TCF4-258ENST00000627320 DZIP1Q86YF9 867 aaKnown RBP10.64□□□□□ -0.71
TCF4-258ENST00000627320 LPAR1Q92633 364 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 LRFN3Q9BTN0 628 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms