RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ANKRD45Q5TZF3 282 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 GADL1Q6ZQY3 521 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 PI4K2BQ8TCG2 481 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 ARMT1Q9H993 441 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 EFCC1Q9HA90 598 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 PNMA3Q9UL41 463 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 ZBTB21Q9ULJ3 1066 aa26.92■■□□□ 1.9
SF1-220ENST00000626028 SALL3Q9BXA9 1300 aa26.91■■□□□ 1.9
SF1-220ENST00000626028 GABPAQ06546 454 aa26.91■■□□□ 1.9
SF1-220ENST00000626028 SDR42E1Q8WUS8 393 aa26.91■■□□□ 1.9
SF1-220ENST00000626028 HPS5Q9UPZ3 1129 aa26.91■■□□□ 1.9
SF1-220ENST00000626028 PLCD1P51178 756 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 BACE1P56817 501 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 LACTBP83111 547 aaPredicted RBP26.9■■□□□ 1.9
SF1-220ENST00000626028 TICAM2Q86XR7 235 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 SMC5Q8IY18 1101 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 AMOTL1Q8IY63 956 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 APPBP2Q92624 585 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.9■■□□□ 1.9
SF1-220ENST00000626028 STAP2Q9UGK3 403 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 SWAP70Q9UH65 585 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 SUPT16HQ9Y5B9 1047 aaKnown RBP26.9■■□□□ 1.9
SF1-220ENST00000626028 HTTP42858 3142 aa26.9■■□□□ 1.9
SF1-220ENST00000626028 RNF113AO15541 343 aaKnown RBP26.89■■□□□ 1.9
SF1-220ENST00000626028 CERKLQ49MI3 558 aaPredicted RBP26.89■■□□□ 1.9
SF1-220ENST00000626028 PRMT2P55345 433 aa26.88■■□□□ 1.89
SF1-220ENST00000626028 TSHZ3Q63HK5 1081 aa26.88■■□□□ 1.89
SF1-220ENST00000626028 GIMAP6Q6P9H5 292 aa26.88■■□□□ 1.89
SF1-220ENST00000626028 CCDC84Q86UT8 332 aaPredicted RBP26.88■■□□□ 1.89
SF1-220ENST00000626028 PUS7LQ9H0K6 701 aaKnown RBP26.88■■□□□ 1.89
SF1-220ENST00000626028 PTPN22Q9Y2R2 807 aa26.88■■□□□ 1.89
SF1-220ENST00000626028 USP17L10C9JJH3 530 aa26.87■■□□□ 1.89
SF1-220ENST00000626028 GDF11O95390 407 aa26.87■■□□□ 1.89
SF1-220ENST00000626028 HMGCS2P54868 508 aa26.87■■□□□ 1.89
SF1-220ENST00000626028 SLC4A8Q2Y0W8 1093 aa26.87■■□□□ 1.89
SF1-220ENST00000626028 EXOC6Q8TAG9 804 aa26.87■■□□□ 1.89
SF1-220ENST00000626028 CABP5Q9NP86 173 aa26.87■■□□□ 1.89
SF1-220ENST00000626028 GH2P01242 217 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 BCRP11274 1271 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 GNAT2P19087 354 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 SHMT1P34896 483 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 JAG1P78504 1218 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 ABCB5Q2M3G0 1257 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 SLFNL1Q499Z3 407 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 OTUD7AQ8TE49 926 aaPredicted RBP26.86■■□□□ 1.89
SF1-220ENST00000626028 STRBPQ96SI9 672 aaKnown RBP26.86■■□□□ 1.89
SF1-220ENST00000626028 TMOD4Q9NZQ9 345 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 CPA4Q9UI42 421 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 SLC4A4Q9Y6R1 1079 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 ZSWIM8A7E2V4 1837 aa26.86■■□□□ 1.89
SF1-220ENST00000626028 RBBP6Q7Z6E9 1792 aaKnown RBP26.85■■□□□ 1.89
SF1-220ENST00000626028 CYP2C8P10632 490 aa26.85■■□□□ 1.89
SF1-220ENST00000626028 RGS19P49795 217 aa26.85■■□□□ 1.89
SF1-220ENST00000626028 MTMR2Q13614 643 aa26.85■■□□□ 1.89
SF1-220ENST00000626028 SMCR8Q8TEV9 937 aaPredicted RBP26.85■■□□□ 1.89
SF1-220ENST00000626028 PRKAB2O43741 272 aa26.84■■□□□ 1.89
SF1-220ENST00000626028 HOXA7P31268 230 aaPredicted RBP26.84■■□□□ 1.89
SF1-220ENST00000626028 C12orf60Q5U649 245 aa26.84■■□□□ 1.89
SF1-220ENST00000626028 ARPP21Q9UBL0 812 aaPredicted RBP26.84■■□□□ 1.89
SF1-220ENST00000626028 OSBPP22059 807 aa26.83■■□□□ 1.89
SF1-220ENST00000626028 HOXD10P28358 340 aa26.83■■□□□ 1.89
SF1-220ENST00000626028 GCLCP48506 637 aaPredicted RBP26.83■■□□□ 1.89
SF1-220ENST00000626028 PDE1AP54750 535 aa26.83■■□□□ 1.89
SF1-220ENST00000626028 TREML2Q5T2D2 321 aa26.83■■□□□ 1.89
SF1-220ENST00000626028 OSBP2Q969R2 916 aa26.83■■□□□ 1.89
SF1-220ENST00000626028 CENPFP49454 3210 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 USP17L12C9JPN9 530 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 USP17L21D6R901 530 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 CHGBP05060 677 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 USP14P54578 494 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 USP17L2Q6R6M4 530 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 EVI5LQ96CN4 794 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 CCDC17Q96LX7 622 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 FSD1Q9BTV5 496 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 DOCK3Q8IZD9 2030 aa26.82■■□□□ 1.88
SF1-220ENST00000626028 CAP1Q01518 475 aa26.81■■□□□ 1.88
SF1-220ENST00000626028 SBK1Q52WX2 424 aa26.81■■□□□ 1.88
SF1-220ENST00000626028 C12orf42Q96LP6 360 aa26.81■■□□□ 1.88
SF1-220ENST00000626028 KIAA1683Q9H0B3 1180 aa26.81■■□□□ 1.88
SF1-220ENST00000626028 NUCB1Q02818 461 aa26.8■■□□□ 1.88
SF1-220ENST00000626028 RAB3GAP1Q15042 981 aa26.8■■□□□ 1.88
SF1-220ENST00000626028 FAM110CQ1W6H9 321 aa26.8■■□□□ 1.88
SF1-220ENST00000626028 SHROOM1Q2M3G4 852 aaPredicted RBP26.8■■□□□ 1.88
SF1-220ENST00000626028 TMEM179Q6ZVK1 233 aa26.8■■□□□ 1.88
SF1-220ENST00000626028 C16orf86Q6ZW13 317 aa26.8■■□□□ 1.88
SF1-220ENST00000626028 GSG1L2A8MUP6 293 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 GPAA1O43292 621 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 IGHDP01880 384 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 PSMC4P43686 418 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 FCGRTP55899 365 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 CTR9Q6PD62 1173 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 CHD1LQ86WJ1 897 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 GTF3C2Q8WUA4 911 aaPredicted RBP26.79■■□□□ 1.88
SF1-220ENST00000626028 ARMC5Q96C12 935 aa26.79■■□□□ 1.88
SF1-220ENST00000626028 ASCC2Q9H1I8 757 aaPredicted RBP26.79■■□□□ 1.88
SF1-220ENST00000626028 CYP2D6P10635 497 aa26.78■■□□□ 1.88
SF1-220ENST00000626028 ZMYM1Q5SVZ6 1142 aa26.78■■□□□ 1.88
SF1-220ENST00000626028 NBPF11Q86T75 865 aa26.78■■□□□ 1.88
SF1-220ENST00000626028 FEZ1Q99689 392 aa26.78■■□□□ 1.88
SF1-220ENST00000626028 LNPKQ9C0E8 428 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms