RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 THEGQ9P2T0 379 aa17.39■□□□□ 0.37
SNX1-214ENST00000625244 SYNGAP1Q96PV0 1343 aa17.39■□□□□ 0.37
SNX1-214ENST00000625244 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
SNX1-214ENST00000625244 MSCO60682 206 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 DNAJB2P25686 324 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 ITGB8P26012 769 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 BTDP43251 543 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 TRPV1Q8NER1 839 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
SNX1-214ENST00000625244 PAGR1Q9BTK6 254 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 ZNF576Q9H609 170 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 UTYO14607 1347 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
SNX1-214ENST00000625244 BACE1P56817 501 aa17.37■□□□□ 0.37
SNX1-214ENST00000625244 MRPS5P82675 430 aaKnown RBP17.37■□□□□ 0.37
SNX1-214ENST00000625244 SNX17Q15036 470 aa17.37■□□□□ 0.37
SNX1-214ENST00000625244 TMOD4Q9NZQ9 345 aa17.37■□□□□ 0.37
SNX1-214ENST00000625244 NDUFB9Q9Y6M9 179 aa17.37■□□□□ 0.37
SNX1-214ENST00000625244 RLFQ13129 1914 aa17.37■□□□□ 0.37
SNX1-214ENST00000625244 MYH2Q9UKX2 1941 aa17.37■□□□□ 0.37
SNX1-214ENST00000625244 CYP2C19P33261 490 aa17.36■□□□□ 0.37
SNX1-214ENST00000625244 RHBDL3P58872 404 aa17.36■□□□□ 0.37
SNX1-214ENST00000625244 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
SNX1-214ENST00000625244 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
SNX1-214ENST00000625244 NECAB3Q96P71 396 aaPredicted RBP17.36■□□□□ 0.37
SNX1-214ENST00000625244 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
SNX1-214ENST00000625244 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
SNX1-214ENST00000625244 PHKA1P46020 1223 aa17.35■□□□□ 0.37
SNX1-214ENST00000625244 DZIP1Q86YF9 867 aaKnown RBP17.35■□□□□ 0.37
SNX1-214ENST00000625244 TIFAQ96CG3 184 aa17.35■□□□□ 0.37
SNX1-214ENST00000625244 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
SNX1-214ENST00000625244 CWC22Q9HCG8 908 aaKnown RBP17.35■□□□□ 0.37
SNX1-214ENST00000625244 GNL3LQ9NVN8 582 aaKnown RBP17.35■□□□□ 0.37
SNX1-214ENST00000625244 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
SNX1-214ENST00000625244 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.34■□□□□ 0.37
SNX1-214ENST00000625244 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.34■□□□□ 0.37
SNX1-214ENST00000625244 EYA2O00167 538 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 JAG1P78504 1218 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 ATP2B2Q01814 1243 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
SNX1-214ENST00000625244 MYO9BQ13459 2157 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 IL16Q14005 1332 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 AKNAD1Q5T1N1 836 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 ARRDC4Q8NCT1 418 aa17.34■□□□□ 0.37
SNX1-214ENST00000625244 ARIH1Q9Y4X5 557 aaPredicted RBP17.34■□□□□ 0.37
SNX1-214ENST00000625244 MROH7-TTC4A0A0A0MT08 1334 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 KBTBD13C9JR72 458 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
SNX1-214ENST00000625244 CNMDO75829 334 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 TLE2Q04725 743 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 ATG9AQ7Z3C6 839 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 NPLOC4Q8TAT6 608 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 GAS2L1Q99501 681 aaPredicted RBP17.33■□□□□ 0.36
SNX1-214ENST00000625244 ATAD5Q96QE3 1844 aa17.33■□□□□ 0.36
SNX1-214ENST00000625244 GPR75-ASB3A0A0A6YYF3 556 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 SEMA3EO15041 775 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 IGHA2P01877 340 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
SNX1-214ENST00000625244 HOXC6P09630 235 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 CYBAP13498 195 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 PTPREP23469 700 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 ADCYAP1R1P41586 468 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 RFX5P48382 616 aaPredicted RBP17.32■□□□□ 0.36
SNX1-214ENST00000625244 CCDC85BQ15834 202 aaPredicted RBP17.32■□□□□ 0.36
SNX1-214ENST00000625244 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
SNX1-214ENST00000625244 SLF2Q8IX21 1173 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 ZGPATQ8N5A5 531 aaKnown RBP17.32■□□□□ 0.36
SNX1-214ENST00000625244 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 MUC6Q6W4X9 2439 aa17.32■□□□□ 0.36
SNX1-214ENST00000625244 SLC15A5A6NIM6 579 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
SNX1-214ENST00000625244 DDX10Q13206 875 aaKnown RBP17.31■□□□□ 0.36
SNX1-214ENST00000625244 ADGRE1Q14246 886 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 ATP2B3Q16720 1220 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 WDR78Q5VTH9 848 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 C1orf53Q5VUE5 145 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 IL27Q8NEV9 243 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 ZNF384Q8TF68 577 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
SNX1-214ENST00000625244 HCN4Q9Y3Q4 1203 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
SNX1-214ENST00000625244 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
SNX1-214ENST00000625244 PBX2P40425 430 aa17.3■□□□□ 0.36
SNX1-214ENST00000625244 GRB14Q14449 540 aa17.3■□□□□ 0.36
SNX1-214ENST00000625244 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
SNX1-214ENST00000625244 EMILIN3Q9NT22 766 aa17.3■□□□□ 0.36
SNX1-214ENST00000625244 ASNSP08243 561 aa17.29■□□□□ 0.36
SNX1-214ENST00000625244 CLTBP09497 229 aa17.29■□□□□ 0.36
SNX1-214ENST00000625244 ADORA1P30542 326 aa17.29■□□□□ 0.36
SNX1-214ENST00000625244 MECOMQ03112 1051 aa17.29■□□□□ 0.36
SNX1-214ENST00000625244 FPGSQ05932 587 aa17.29■□□□□ 0.36
SNX1-214ENST00000625244 RASGRF1Q13972 1273 aa17.29■□□□□ 0.36
SNX1-214ENST00000625244 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
SNX1-214ENST00000625244 RABGAP1Q9Y3P9 1069 aa17.29■□□□□ 0.36
SNX1-214ENST00000625244 KIAA0355O15063 1070 aa17.28■□□□□ 0.36
SNX1-214ENST00000625244 BMP1P13497 986 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms