RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 WDR37Q9Y2I8 494 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 U3KPZ7 1027 aaPredicted RBP10.41□□□□□ -0.74
USB1-216ENST00000624720 ABCC4O15439 1325 aa10.41□□□□□ -0.74
USB1-216ENST00000624720 PNMA6EA0A0J9YXQ4 647 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 CCDC194A0A1B0GVG4 234 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 FGFR1OPO95684 399 aaKnown RBP10.4□□□□□ -0.74
USB1-216ENST00000624720 HDAC4P56524 1084 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 KCNQ4P56696 695 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 RNF168Q8IYW5 571 aaPredicted RBP10.4□□□□□ -0.74
USB1-216ENST00000624720 FAM76AQ8TAV0 307 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 C8orf37Q96NL8 207 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 UBXN6Q9BZV1 441 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 RTEL1Q9NZ71 1219 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 MAP3K2Q9Y2U5 619 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 SPO11Q9Y5K1 396 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 NHSL1Q5SYE7 1610 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 AHCYL1O43865 530 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 RPSAP08865 295 aaKnown RBP10.4□□□□□ -0.74
USB1-216ENST00000624720 MSL3P1P0C860 447 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 SLC8A3P57103 927 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 GUCY1B3Q02153 619 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 CEP135Q66GS9 1140 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 GIMAP6Q6P9H5 292 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 ERMNQ8TAM6 284 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 HPS3Q969F9 1004 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 OSBPL10Q9BXB5 764 aa10.4□□□□□ -0.74
USB1-216ENST00000624720 GIGYF1O75420 1035 aaPredicted RBP10.4□□□□□ -0.75
USB1-216ENST00000624720 FESP07332 822 aa10.4□□□□□ -0.75
USB1-216ENST00000624720 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.75
USB1-216ENST00000624720 LIG3P49916 1009 aa10.4□□□□□ -0.75
USB1-216ENST00000624720 CLCN6P51797 869 aa10.4□□□□□ -0.75
USB1-216ENST00000624720 WLSQ5T9L3 541 aa10.4□□□□□ -0.75
USB1-216ENST00000624720 AGAP9Q5VTM2 703 aa10.4□□□□□ -0.75
USB1-216ENST00000624720 C16orf45Q96MC5 204 aaPredicted RBP10.4□□□□□ -0.75
USB1-216ENST00000624720 SH3GL1Q99961 368 aa10.4□□□□□ -0.75
USB1-216ENST00000624720 INO80BQ9C086 356 aaPredicted RBP10.4□□□□□ -0.75
USB1-216ENST00000624720 SLC52A2Q9HAB3 445 aa10.4□□□□□ -0.75
USB1-216ENST00000624720 PHLPP1O60346 1717 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 RGL2O15211 777 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 A1BGP04217 495 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 IL2RBP14784 551 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 CWF19L1Q69YN2 538 aaKnown RBP10.39□□□□□ -0.75
USB1-216ENST00000624720 CHD1LQ86WJ1 897 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 SLF2Q8IX21 1173 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 WHAMMQ8TF30 809 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 CTNNBL1Q8WYA6 563 aaPredicted RBP10.39□□□□□ -0.75
USB1-216ENST00000624720 CDCA7Q9BWT1 371 aaPredicted RBP10.39□□□□□ -0.75
USB1-216ENST00000624720 COMMD8Q9NX08 183 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 PPP1R1BQ9UD71 204 aaPredicted RBP10.39□□□□□ -0.75
USB1-216ENST00000624720 WDR17Q8IZU2 1322 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 SYCE3A1L190 88 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
USB1-216ENST00000624720 TMCO3Q6UWJ1 677 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 RIC3Q7Z5B4 369 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 FNBP4Q8N3X1 1017 aaPredicted RBP10.39□□□□□ -0.75
USB1-216ENST00000624720 SMYD1Q8NB12 490 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 LMBR1Q8WVP7 490 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 GIMAP1Q8WWP7 306 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 CUL5Q93034 780 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 UIMC1Q96RL1 719 aa10.39□□□□□ -0.75
USB1-216ENST00000624720 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 COL16A1Q07092 1604 aaPredicted RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 BBOX1O75936 387 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 MBD4O95243 580 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 CEP85Q6P2H3 762 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 COPS6Q7L5N1 327 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 NEUROD6Q96NK8 337 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
USB1-216ENST00000624720 RPAP3Q9H6T3 665 aaPredicted RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 UBTFL1P0CB47 393 aaPredicted RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 SH3BGRP55822 239 aaPredicted RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 DMPKQ09013 629 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 EIF2B5Q13144 721 aaKnown RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 PARP10Q53GL7 1025 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 ANKK1Q8NFD2 765 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 KLHDC4Q8TBB5 520 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 XAGE3Q8WTP9 111 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 ARHGAP45Q92619 1136 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 SIL1Q9H173 461 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 IGSF5Q9NSI5 407 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 ZMAT5Q9UDW3 170 aaKnown RBP10.38□□□□□ -0.75
USB1-216ENST00000624720 ASAP1Q9ULH1 1129 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 KIF24Q5T7B8 1368 aa10.38□□□□□ -0.75
USB1-216ENST00000624720 ZEB2O60315 1214 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 HSPA1LP34931 641 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 MATR3P43243 847 aaKnown RBP eCLIP10.37□□□□□ -0.75
USB1-216ENST00000624720 PABPC4Q13310 644 aaKnown RBP eCLIP10.37□□□□□ -0.75
USB1-216ENST00000624720 SMC1AQ14683 1233 aaKnown RBP10.37□□□□□ -0.75
USB1-216ENST00000624720 GNPTABQ3T906 1256 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 C4orf46Q504U0 113 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 FAM117BQ6P1L5 589 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 NEK10Q6ZWH5 1172 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 SMIM5Q71RC9 77 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 NANOGNBQ7Z5D8 188 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 JAKMIP2Q96AA8 810 aa10.37□□□□□ -0.75
USB1-216ENST00000624720 OSBPL9Q96SU4 736 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms