RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 PDHXO00330 501 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 FKTNO75072 461 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 TATDN1Q6P1N9 297 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 PRRT2Q7Z6L0 340 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 ANKRD23Q86SG2 305 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 ZCCHC17Q9NP64 241 aaKnown RBP16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 CABP5Q9NP86 173 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 GINM1Q9NU53 330 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 ZBTB21Q9ULJ3 1066 aa16.75■□□□□ 0.27
PCDHGC3-208ENST00000622836 DDX60LQ5H9U9 1706 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 GH2P01242 217 aa16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 TDO2P48775 406 aa16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 ABCB5Q2M3G0 1257 aa16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 DYNLL2Q96FJ2 89 aa16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 SEC62Q99442 399 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 NACAP1Q9BZK3 213 aa16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 ARPP21Q9UBL0 812 aaPredicted RBP16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 SWAP70Q9UH65 585 aa16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 BAZ2AQ9UIF9 1905 aaKnown RBP16.74■□□□□ 0.27
PCDHGC3-208ENST00000622836 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 NEFLP07196 543 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 SHMT1P34896 483 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 EVX2Q03828 476 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 DGKZQ13574 1117 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 RAB3GAP1Q15042 981 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 SHROOM1Q2M3G4 852 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 C12orf60Q5U649 245 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 CTR9Q6PD62 1173 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 OSBPL3Q9H4L5 887 aa16.73■□□□□ 0.27
PCDHGC3-208ENST00000622836 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 MINDY4BA8MYZ0 360 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 HMGCS2P54868 508 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 JAG1P78504 1218 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 GABPAQ06546 454 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 MTMR2Q13614 643 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 GIMAP6Q6P9H5 292 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 SLC44A5Q8NCS7 719 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 PARK7Q99497 189 aaKnown RBP16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 FEZ1Q99689 392 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 WDR18Q9BV38 432 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
PCDHGC3-208ENST00000622836 PHIPQ8WWQ0 1821 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 PATL2C9JE40 543 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 TLR2O60603 784 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 SP3Q02447 781 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 MOGSQ13724 837 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 STK11IPQ8N1F8 1099 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 NAPBQ9H115 298 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
PCDHGC3-208ENST00000622836 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-208ENST00000622836 PDE4AP27815 886 aa16.7■□□□□ 0.26
PCDHGC3-208ENST00000622836 BACE1P56817 501 aa16.7■□□□□ 0.26
PCDHGC3-208ENST00000622836 PROCA1Q8NCQ7 364 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-208ENST00000622836 MCOLN1Q9GZU1 580 aa16.7■□□□□ 0.26
PCDHGC3-208ENST00000622836 DIAPH3Q9NSV4 1193 aa16.7■□□□□ 0.26
PCDHGC3-208ENST00000622836 AGTPBP1Q9UPW5 1226 aa16.7■□□□□ 0.26
PCDHGC3-208ENST00000622836 C19orf81C9J6K1 198 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 CYP2C8P10632 490 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 CDK8P49336 464 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 SBK1Q52WX2 424 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 IFNL3Q8IZI9 196 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 SMCR8Q8TEV9 937 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 FAM227BQ96M60 508 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 EPB41L4AQ9HCS5 686 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 CPA4Q9UI42 421 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 PNMA3Q9UL41 463 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 SLC45A1Q9Y2W3 748 aa16.69■□□□□ 0.26
PCDHGC3-208ENST00000622836 PTPRFP10586 1907 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 A0A0D9SFI3 127 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 SMIM22K7EJ46 135 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 SDSP20132 328 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 KIF22Q14807 665 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 SEPT2Q15019 361 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 ZYXQ15942 572 aaKnown RBP16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 TREML2Q5T2D2 321 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 CD99L2Q8TCZ2 262 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 CCDC17Q96LX7 622 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
PCDHGC3-208ENST00000622836 MYH8P13535 1937 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 HIP1O00291 1037 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 CAPN15O75808 1086 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms