RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	PAGR1	Q9BTK6	254 aa		12.86	□□□□□ -0.35
RRP12-215	ENST00000622320	C1QTNF1	Q9BXJ1	281 aa		12.86	□□□□□ -0.35
RRP12-215	ENST00000622320	AS3MT	Q9HBK9	375 aa		12.86	□□□□□ -0.35
RRP12-215	ENST00000622320	CWC22	Q9HCG8	908 aa	Known RBP	12.86	□□□□□ -0.35
RRP12-215	ENST00000622320	UTY	O14607	1347 aa		12.86	□□□□□ -0.35
RRP12-215	ENST00000622320	USP17L5	A8MUK1	530 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	CNGA1	P29973	690 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	SNX17	Q15036	470 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	GJC2	Q5T442	439 aa	Predicted RBP	12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	SLC39A5	Q6ZMH5	540 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	SH3RF1	Q7Z6J0	888 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	TRMT2A	Q8IZ69	625 aa	Known RBP	12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	ANKRD44	Q8N8A2	993 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	LPIN2	Q92539	896 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	GAS2L1	Q99501	681 aa	Predicted RBP	12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	SRCIN1	Q9C0H9	1055 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	ZNF576	Q9H609	170 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	FLRT1	Q9NZU1	646 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	HCN4	Q9Y3Q4	1203 aa		12.85	□□□□□ -0.35
RRP12-215	ENST00000622320	BDP1	A6H8Y1	2624 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	ZNF236	Q9UL36	1845 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	TRIM43B	A6NCK2	446 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	KBTBD13	C9JR72	458 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	VAMP4	O75379	141 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	HOXA7	P31268	230 aa	Predicted RBP	12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	CAP2	P40123	477 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	BTD	P43251	543 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	MRPS5	P82675	430 aa	Known RBP	12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	POTEE	Q6S8J3	1075 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	SLC4A10	Q6U841	1118 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	DZIP1	Q86YF9	867 aa	Known RBP	12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	TMOD4	Q9NZQ9	345 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	RBPJL	Q9UBG7	517 aa		12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.84	□□□□□ -0.35
RRP12-215	ENST00000622320	EPHB4	P54760	987 aa		12.83	□□□□□ -0.36
RRP12-215	ENST00000622320	EXOSC9	Q06265	439 aa	Known RBP	12.83	□□□□□ -0.36
RRP12-215	ENST00000622320	SLFN5	Q08AF3	891 aa		12.83	□□□□□ -0.36
RRP12-215	ENST00000622320	RRP1B	Q14684	758 aa	Known RBP	12.83	□□□□□ -0.36
RRP12-215	ENST00000622320		Q3C1V9	767 aa		12.83	□□□□□ -0.36
RRP12-215	ENST00000622320	AKNAD1	Q5T1N1	836 aa		12.83	□□□□□ -0.36
RRP12-215	ENST00000622320	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.83	□□□□□ -0.36
RRP12-215	ENST00000622320	TIFA	Q96CG3	184 aa		12.83	□□□□□ -0.36
RRP12-215	ENST00000622320	MROH7-TTC4	A0A0A0MT08	1334 aa		12.83	□□□□□ -0.36
RRP12-215	ENST00000622320		E9PSI1	815 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	CYBA	P13498	195 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	ITGB8	P26012	769 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	CYP2C19	P33261	490 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	BACE1	P56817	501 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	ZGPAT	Q8N5A5	531 aa	Known RBP	12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	ARRDC4	Q8NCT1	418 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	TRPV1	Q8NER1	839 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	EDC3	Q96F86	508 aa	Known RBP	12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	NECAB3	Q96P71	396 aa	Predicted RBP	12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	WDR18	Q9BV38	432 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	GNL3L	Q9NVN8	582 aa	Known RBP	12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	DENND2A	Q9ULE3	1009 aa		12.82	□□□□□ -0.36
RRP12-215	ENST00000622320	PLXNA1	Q9UIW2	1896 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	SEMA3E	O15041	775 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	GLRX3	O76003	335 aa	Known RBP	12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	PHKA1	P46020	1223 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	RHBDL3	P58872	404 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	WDR78	Q5VTH9	848 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	SLF2	Q8IX21	1173 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	PRDM12	Q9H4Q4	367 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	NDUFB9	Q9Y6M9	179 aa		12.81	□□□□□ -0.36
RRP12-215	ENST00000622320	SLC15A5	A6NIM6	579 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	EYA2	O00167	538 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	NPM3	O75607	178 aa	Known RBP	12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	MYCN	P04198	464 aa	Predicted RBP	12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	HOXC6	P09630	235 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	ATP2B2	Q01814	1243 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	FPGS	Q05932	587 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	ATP2B3	Q16720	1220 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	ANO1	Q5XXA6	986 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	PIEZO1	Q92508	2521 aa		12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	TCF20	Q9UGU0	1960 aa	Known RBP	12.8	□□□□□ -0.36
RRP12-215	ENST00000622320	C19orf81	C9J6K1	198 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	ASNS	P08243	561 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	CLTB	P09497	229 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	PTPRE	P23469	700 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	ADCYAP1R1	P41586	468 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	CCNA1	P78396	465 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	TLE2	Q04725	743 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	CCDC85B	Q15834	202 aa	Predicted RBP	12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	C1orf53	Q5VUE5	145 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	NPLOC4	Q8TAT6	608 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	FERMT2	Q96AC1	680 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	FAM163A	Q96GL9	167 aa	Predicted RBP	12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	LRFN3	Q9BTN0	628 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	ABCF2	Q9UG63	623 aa		12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	HERC5	Q9UII4	1024 aa	Known RBP	12.79	□□□□□ -0.36
RRP12-215	ENST00000622320	CNMD	O75829	334 aa		12.78	□□□□□ -0.36
RRP12-215	ENST00000622320	RAG1	P15918	1043 aa		12.78	□□□□□ -0.36
RRP12-215	ENST00000622320	ADGRE1	Q14246	886 aa		12.78	□□□□□ -0.36
RRP12-215	ENST00000622320	GRB14	Q14449	540 aa		12.78	□□□□□ -0.36
RRP12-215	ENST00000622320	CDCA7L	Q96GN5	454 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms