RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 MAGEB6Q8N7X4 407 aa11.38□□□□□ -0.59
TARDBP-227ENST00000622057 MIGA1Q8NAN2 632 aa11.38□□□□□ -0.59
TARDBP-227ENST00000622057 BCL11AQ9H165 835 aa11.38□□□□□ -0.59
TARDBP-227ENST00000622057 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
TARDBP-227ENST00000622057 NR2E3Q9Y5X4 410 aa11.38□□□□□ -0.59
TARDBP-227ENST00000622057 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-227ENST00000622057 EVI5O60447 810 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 PEX10O60683 326 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 IGSF3O75054 1194 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 CYP2B6P20813 491 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 CEP85Q6P2H3 762 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
TARDBP-227ENST00000622057 GPRC5AQ8NFJ5 357 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 PAWRQ96IZ0 340 aaKnown RBP11.37□□□□□ -0.59
TARDBP-227ENST00000622057 ANTXR1Q9H6X2 564 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
TARDBP-227ENST00000622057 GJD2Q9UKL4 321 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 ZBTB21Q9ULJ3 1066 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
TARDBP-227ENST00000622057 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 HOXA7P31268 230 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-227ENST00000622057 HERVK_113P62684 666 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 MAP3K12Q12852 859 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 TRIM32Q13049 653 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 Q3C1V9 767 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 AACSQ86V21 672 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 CCAR1Q8IX12 1150 aaKnown RBP11.36□□□□□ -0.59
TARDBP-227ENST00000622057 PANK1Q8TE04 598 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.59
TARDBP-227ENST00000622057 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-227ENST00000622057 PAK6Q9NQU5 681 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-227ENST00000622057 GINM1Q9NU53 330 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 MORF4L1Q9UBU8 362 aa11.36□□□□□ -0.59
TARDBP-227ENST00000622057 GH2P01242 217 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 HMGCRP04035 888 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 CAPN2P17655 700 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 ZYXQ15942 572 aaKnown RBP11.35□□□□□ -0.59
TARDBP-227ENST00000622057 USP17L2Q6R6M4 530 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 NECAB2Q7Z6G3 386 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 ERC1Q8IUD2 1116 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 NUDT12Q9BQG2 462 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 PAGR1Q9BTK6 254 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 CRISPLD2Q9H0B8 497 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 TXNRD2Q9NNW7 524 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 IL1RAPL2Q9NP60 686 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 EMILIN3Q9NT22 766 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 RBPJLQ9UBG7 517 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 RPTORQ8N122 1335 aa11.35□□□□□ -0.59
TARDBP-227ENST00000622057 APBB1O00213 710 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 POLR3DP05423 398 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-227ENST00000622057 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 CERKLQ49MI3 558 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-227ENST00000622057 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
TARDBP-227ENST00000622057 TATDN1Q6P1N9 297 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 TTC6Q86TZ1 520 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
TARDBP-227ENST00000622057 TRIB2Q92519 343 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 FEZ1Q99689 392 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 CWC22Q9HCG8 908 aaKnown RBP11.34□□□□□ -0.59
TARDBP-227ENST00000622057 SERPINB13Q9UIV8 391 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 MGAMO43451 1857 aa11.34□□□□□ -0.59
TARDBP-227ENST00000622057 PLCD1P51178 756 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 ERVK-9P63128 1117 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 ERVK-24P63145 666 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 ABCB5Q2M3G0 1257 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 CERS3Q8IU89 383 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
TARDBP-227ENST00000622057 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 MAPK4P31152 587 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP14P54578 494 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-227ENST00000622057 SLC9C2Q5TAH2 1124 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 WDR78Q5VTH9 848 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 GPR142Q7Z601 462 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 CLASRPQ8N2M8 674 aaKnown RBP11.32□□□□□ -0.6
TARDBP-227ENST00000622057 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-227ENST00000622057 SOCS4Q8WXH5 440 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
TARDBP-227ENST00000622057 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 PORCNQ9H237 461 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 PTPRFP10586 1907 aa11.32□□□□□ -0.6
TARDBP-227ENST00000622057 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
TARDBP-227ENST00000622057 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms