RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 FAM163AQ96GL9 167 aaPredicted RBP3.04□□□□□ -1.92
CPNE3-211ENST00000621526 PHOX2BQ99453 314 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 SEZ6LQ9BYH1 1024 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 OSBPL5Q9H0X9 879 aaPredicted RBP3.04□□□□□ -1.92
CPNE3-211ENST00000621526 NKX2-4Q9H2Z4 354 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 IL23AQ9NPF7 189 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 GINM1Q9NU53 330 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 SLC5A4Q9NY91 659 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 TBX21Q9UL17 535 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 RABGAP1Q9Y3P9 1069 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 KIF20BQ96Q89 1820 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 ANKRD36CQ5JPF3 1778 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 LRRC37AA6NMS7 1700 aa3.04□□□□□ -1.92
CPNE3-211ENST00000621526 TAF1P21675 1872 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 MROH7Q68CQ1 1323 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 TRIM75PA6NK02 468 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 USP17L5A8MUK1 530 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 MAP4K4O95819 1239 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-211ENST00000621526 IGKV5-2P06315 115 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 HSPA5P11021 654 aaKnown RBP3.03□□□□□ -1.92
CPNE3-211ENST00000621526 CYBAP13498 195 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 SSTR3P32745 418 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-211ENST00000621526 CASP7P55210 303 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 BACE1P56817 501 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 HERVK_113P62684 666 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 ERVK-9P63128 1117 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 ERVK-24P63145 666 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 IRX3P78415 501 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-211ENST00000621526 TCF15Q12870 199 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 GCKRQ14397 625 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 GRIK5Q16478 980 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 CAVIN4Q5BKX8 364 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 HERC4Q5GLZ8 1057 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-211ENST00000621526 TMEM67Q5HYA8 995 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 IER5LQ5T953 404 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 DUSP27Q5VZP5 1158 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 PPP2R2DQ66LE6 453 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 LBX2Q6XYB7 198 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 LDHAL6AQ6ZMR3 332 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 TRPV1Q8NER1 839 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 PRSS33Q8NF86 280 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 WDR66Q8TBY9 1149 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 FERMT2Q96AC1 680 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 PHAXQ9H814 394 aaKnown RBP3.03□□□□□ -1.92
CPNE3-211ENST00000621526 AS3MTQ9HBK9 375 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 TXNRD2Q9NNW7 524 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 USP40Q9NVE5 1235 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 FLRT1Q9NZU1 646 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 FAM198AQ9UFP1 575 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 TRPC6Q9Y210 931 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 JAG2Q9Y219 1238 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 FAM50BQ9Y247 325 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 YBX2Q9Y2T7 364 aaKnown RBP3.03□□□□□ -1.92
CPNE3-211ENST00000621526 SLC4A7Q9Y6M7 1214 aa3.03□□□□□ -1.92
CPNE3-211ENST00000621526 NUP98P52948 1817 aa3.03□□□□□ -1.93
CPNE3-211ENST00000621526 LAMB1P07942 1786 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 ATRXP46100 2492 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 USP34Q70CQ2 3546 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 CACNA1BQ00975 2339 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 SPTBN4Q9H254 2564 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 PI4KAP2A4QPH2 592 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 MOXD2PA6NHM9 499 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 NEURL1BA8MQ27 555 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 KIF28PB7ZC32 967 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 USP17L10C9JJH3 530 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 NCK2O43639 380 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 PQBP1O60828 265 aaKnown RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 FRAT2O75474 233 aaPredicted RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 CSF2RAP15509 400 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 PPP2R1AP30153 589 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 CYP2C19P33261 490 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 IRS1P35568 1242 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 CAP2P40123 477 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 GYG1P46976 350 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 HMGCS2P54868 508 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 TCP10Q12799 353 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 NFIAQ12857 509 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 GRB14Q14449 540 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 CCDC57Q2TAC2 916 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 CCSAPQ6IQ19 270 aaPredicted RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 DPP9Q86TI2 863 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 VPS37DQ86XT2 251 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 FOXP4Q8IVH2 680 aaPredicted RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 ZFPM1Q8IX07 1006 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 ABRAQ8N0Z2 381 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 PI4KAP1Q8N8J0 262 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 NEK9Q8TD19 979 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 ATOH1Q92858 354 aaPredicted RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 PBXIP1Q96AQ6 731 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 PORCNQ9H237 461 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 UBE2ZQ9H832 354 aaPredicted RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 ALG13Q9NP73 1137 aaKnown RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 HOXC10Q9NYD6 342 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 TMOD4Q9NZQ9 345 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 MAP3K2Q9Y2U5 619 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 IVNS1ABPQ9Y6Y0 642 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 RIF1Q5UIP0 2472 aaKnown RBP3.02□□□□□ -1.93
CPNE3-211ENST00000621526 WDFY4Q6ZS81 3184 aa3.02□□□□□ -1.93
CPNE3-211ENST00000621526 ATRNL1Q5VV63 1379 aa3.01□□□□□ -1.93
CPNE3-211ENST00000621526 KIF16BQ96L93 1317 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms