RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 GPR162Q16538 588 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 IQCA1Q86XH1 822 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 CLEC10AQ8IUN9 316 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 CCDC82Q8N4S0 544 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 NUP133Q8WUM0 1156 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 IDI2Q9BXS1 227 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 ZDHHC9Q9Y397 364 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 SLC12A7Q9Y666 1083 aa18.67■□□□□ 0.58
CBWD3-216ENST00000621396 CDC27P30260 824 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 EVCP57679 992 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 TTC6Q86TZ1 520 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 IL27Q8NEV9 243 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 CWC22Q9HCG8 908 aaKnown RBP18.66■□□□□ 0.58
CBWD3-216ENST00000621396 SERPINB13Q9UIV8 391 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 LAMB1P07942 1786 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 WDR19Q8NEZ3 1342 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 DDNO94850 711 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-216ENST00000621396 DNAJC18Q9H819 358 aa18.66■□□□□ 0.58
CBWD3-216ENST00000621396 LIFRP42702 1097 aa18.65■□□□□ 0.58
CBWD3-216ENST00000621396 IFIT1BQ5T764 474 aaKnown RBP18.65■□□□□ 0.58
CBWD3-216ENST00000621396 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
CBWD3-216ENST00000621396 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
CBWD3-216ENST00000621396 DDX60LQ5H9U9 1706 aaKnown RBP18.65■□□□□ 0.58
CBWD3-216ENST00000621396 UBE2Q2LH0YL09 131 aa18.65■□□□□ 0.58
CBWD3-216ENST00000621396 METAP2P50579 478 aaKnown RBP eCLIP18.65■□□□□ 0.58
CBWD3-216ENST00000621396 GABPAQ06546 454 aa18.65■□□□□ 0.58
CBWD3-216ENST00000621396 SGMS1Q86VZ5 419 aa18.65■□□□□ 0.58
CBWD3-216ENST00000621396 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
CBWD3-216ENST00000621396 STX8Q9UNK0 236 aa18.65■□□□□ 0.58
CBWD3-216ENST00000621396 ZBTB43O43298 467 aa18.64■□□□□ 0.58
CBWD3-216ENST00000621396 SYT1P21579 422 aa18.64■□□□□ 0.58
CBWD3-216ENST00000621396 C9orf131Q5VYM1 1079 aa18.64■□□□□ 0.58
CBWD3-216ENST00000621396 NSUN7Q8NE18 718 aaKnown RBP18.64■□□□□ 0.58
CBWD3-216ENST00000621396 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
CBWD3-216ENST00000621396 RCSD1Q6JBY9 416 aa18.64■□□□□ 0.57
CBWD3-216ENST00000621396 RASGRP2Q7LDG7 609 aa18.64■□□□□ 0.57
CBWD3-216ENST00000621396 CRACR2BQ8N4Y2 399 aaPredicted RBP18.64■□□□□ 0.57
CBWD3-216ENST00000621396 CSRNP1Q96S65 589 aa18.64■□□□□ 0.57
CBWD3-216ENST00000621396 FOCADQ5VW36 1801 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 PTPDC1A2A3K4 754 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 HLA-DOAP06340 250 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 AKR1B1P15121 316 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 EPS15P42566 896 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 ZNF654Q8IZM8 581 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 PHKBQ93100 1093 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 TMOD2Q9NZR1 351 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 SHMT1P34896 483 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 RAB3GAP1Q15042 981 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 FAM217BQ9NTX9 383 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-216ENST00000621396 ECM29Q5VYK3 1845 aa18.63■□□□□ 0.57
CBWD3-216ENST00000621396 GOLGA8AA7E2F4 631 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 MPHOSPH10O00566 681 aaKnown RBP18.62■□□□□ 0.57
CBWD3-216ENST00000621396 MIGA2Q7L4E1 593 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 PI4KBQ9UBF8 816 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 CPLX1O14810 134 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 MYO1BO43795 1136 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 ZNF280AP59817 542 aaPredicted RBP18.62■□□□□ 0.57
CBWD3-216ENST00000621396 TRPM4Q8TD43 1214 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 CEP95Q96GE4 821 aa18.62■□□□□ 0.57
CBWD3-216ENST00000621396 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.62■□□□□ 0.57
CBWD3-216ENST00000621396 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
CBWD3-216ENST00000621396 CNTNAP1P78357 1384 aa18.61■□□□□ 0.57
CBWD3-216ENST00000621396 RPS12P25398 132 aaKnown RBP18.61■□□□□ 0.57
CBWD3-216ENST00000621396 ZBED3Q96IU2 234 aaPredicted RBP18.61■□□□□ 0.57
CBWD3-216ENST00000621396 VPS37CA5D8V6 355 aaPredicted RBP18.61■□□□□ 0.57
CBWD3-216ENST00000621396 FDPSP14324 419 aaKnown RBP18.61■□□□□ 0.57
CBWD3-216ENST00000621396 NFKBIBQ15653 356 aa18.61■□□□□ 0.57
CBWD3-216ENST00000621396 PRAMEF18Q5VWM3 479 aa18.61■□□□□ 0.57
CBWD3-216ENST00000621396 LARP1BQ659C4 914 aaKnown RBP18.61■□□□□ 0.57
CBWD3-216ENST00000621396 SYNE3Q6ZMZ3 975 aa18.61■□□□□ 0.57
CBWD3-216ENST00000621396 DPF2Q92785 391 aa18.61■□□□□ 0.57
CBWD3-216ENST00000621396 ZNF287Q9HBT7 754 aa18.61■□□□□ 0.57
CBWD3-216ENST00000621396 SBF1O95248 1867 aa18.61■□□□□ 0.57
CBWD3-216ENST00000621396 GDF11O95390 407 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 GUCY1B3Q02153 619 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 KIF4BQ2VIQ3 1234 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 GPC2Q8N158 579 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 MTMR14Q8NCE2 650 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 DHX36Q9H2U1 1008 aaKnown RBP18.6■□□□□ 0.57
CBWD3-216ENST00000621396 STX6O43752 255 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 GPRC5DQ9NZD1 345 aa18.6■□□□□ 0.57
CBWD3-216ENST00000621396 hCG_1642624A0A1W2PR95 340 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 ENTPD3O75355 529 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 TROAPQ12815 778 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 RRP1BQ14684 758 aaKnown RBP18.59■□□□□ 0.57
CBWD3-216ENST00000621396 OTUD7BQ6GQQ9 843 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 FERMT3Q86UX7 667 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 TMTC2Q8N394 836 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 FAM184AQ8NB25 1140 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 FANCBQ8NB91 859 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 HACL1Q9UJ83 578 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 JAG1P78504 1218 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 NUCB2P80303 420 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 ATP2B2Q01814 1243 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 RASA3Q14644 834 aa18.59■□□□□ 0.57
CBWD3-216ENST00000621396 DLK2Q6UY11 383 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms