RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 XPO4Q9C0E2 1151 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 CCDC113Q9H0I3 377 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 GPR108Q9NPR9 543 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 NOP2P46087 812 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 CMTR1Q8N1G2 835 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 SYNE4Q8N205 404 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 KIF18AQ8NI77 898 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 APPBP2Q92624 585 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 PHKBQ93100 1093 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 DHX58Q96C10 678 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 DRC1Q96MC2 740 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 CTIFO43310 598 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 ZFYP08048 801 aaPredicted RBP9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 GSTO1P78417 241 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 GGA1Q9UJY5 639 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 ZNF215Q9UL58 517 aaPredicted RBP9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 SLIT3O75094 1523 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 URI1O94763 535 aaPredicted RBP9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 ANO1Q5XXA6 986 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 FAM196AQ6ZSG2 479 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 DENND2AQ9ULE3 1009 aa9.38□□□□□ -0.91
PTPDC1-204ENST00000620992 C5P01031 1676 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 TMCO5BA8MYB1 307 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 DDX39AO00148 427 aaKnown RBP9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 TOP1P11387 765 aaKnown RBP9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 SPECC1Q5M775 1068 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 LUC7LQ9NQ29 371 aaKnown RBP9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 SPDYE3A6NKU9 549 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 SNAP23O00161 211 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 PFKFB1P16118 471 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 SYKP43405 635 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 GSDMDP57764 484 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 PTPN21Q16825 1174 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 LETM2Q2VYF4 491 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 USH1GQ495M9 461 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 ANKRD7Q92527 254 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 AGXT2Q9BYV1 514 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 TSPYL1Q9H0U9 437 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 KIF28PB7ZC32 967 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 FAM47AQ5JRC9 791 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 FKBP15Q5T1M5 1219 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 AFDNP55196 1824 aaKnown RBP9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 SALL1Q9NSC2 1324 aa9.37□□□□□ -0.91
PTPDC1-204ENST00000620992 RDXP35241 583 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 GJC1P36383 396 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 RPS8P62241 208 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 KIF4BQ2VIQ3 1234 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 CGNQ9P2M7 1197 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 TBCAO75347 108 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 CIAO1O76071 339 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 ASIC1P78348 528 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 TCIRG1Q13488 830 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 CCDC102BQ68D86 513 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 STAMQ92783 540 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 EYA3Q99504 573 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 ZBTB1Q9Y2K1 713 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 N4BP3O15049 544 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 YEATS4O95619 227 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 CCZ1BP86790 482 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 CCZ1P86791 482 aaPredicted RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 MKRN3Q13064 507 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 SEPT7Q16181 437 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 TAF4BQ92750 862 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 MRC1P22897 1456 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 A0A1W2PQ27 194 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 A0A1W2PQ64 194 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 A0A1W2PQD8 194 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 GSTTP1A0A1W2PQM5 241 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 PHACTR2O75167 634 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 MYCLP12524 364 aaPredicted RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 ANTXR2P58335 489 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 ELF2Q15723 593 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 MFSD14BQ5SR56 506 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 JAKMIP3Q5VZ66 844 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 SYT10Q6XYQ8 523 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 CCDC12Q8WUD4 166 aaPredicted RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 KRT23Q9C075 422 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 V9GY48 417 aaPredicted RBP9.36□□□□□ -0.91
PTPDC1-204ENST00000620992 ZSCAN20P17040 1043 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 BCAMP50895 628 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 KIF23Q02241 960 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 SPA17Q15506 151 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 ZNF174Q15697 407 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 MB21D2Q8IYB1 491 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 CLIC6Q96NY7 704 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 TSG101Q99816 390 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 ANGEL1Q9UNK9 670 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 HPS5Q9UPZ3 1129 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 LOC102724428A0A0B4J2F2 783 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 SIK1P57059 783 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 RRAGBQ5VZM2 374 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms