RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 PRAMEF13Q5VWM6 474 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 SLC6A19Q695T7 634 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 ARMCX6Q7L4S7 300 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 MCF2L2Q86YR7 1114 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 MCATQ8IVS2 390 aaKnown RBP5.57□□□□□ -1.52
MALAT1-216ENST00000620465 FAM13CQ8NE31 585 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 TMEM40Q8WWA1 233 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 SREK1Q8WXA9 508 aaKnown RBP5.57□□□□□ -1.52
MALAT1-216ENST00000620465 CRBNQ96SW2 442 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 FOXQ1Q9C009 403 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 TANGO6Q9C0B7 1094 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
MALAT1-216ENST00000620465 HMX2A2RU54 273 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 DYNC1LI2O43237 492 aaPredicted RBP5.56□□□□□ -1.52
MALAT1-216ENST00000620465 CST3P01034 146 aaPredicted RBP5.56□□□□□ -1.52
MALAT1-216ENST00000620465 H2AFB1P0C5Y9 115 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 H2AFB2P0C5Z0 115 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 EIF6P56537 245 aaKnown RBP5.56□□□□□ -1.52
MALAT1-216ENST00000620465 SLBPQ14493 270 aaKnown RBP eCLIP5.56□□□□□ -1.52
MALAT1-216ENST00000620465 OVOS1Q6IE37 1185 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 SEZ6L2Q6UXD5 910 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 SLFN12Q8IYM2 578 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 OR6P1Q8NGX9 317 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 DPH2Q9BQC3 489 aaPredicted RBP5.56□□□□□ -1.52
MALAT1-216ENST00000620465 LGR6Q9HBX8 967 aa5.56□□□□□ -1.52
MALAT1-216ENST00000620465 DNAJA2O60884 412 aa5.55□□□□□ -1.52
MALAT1-216ENST00000620465 CDK5R2Q13319 367 aa5.55□□□□□ -1.52
MALAT1-216ENST00000620465 LSRQ86X29 649 aaPredicted RBP5.55□□□□□ -1.52
MALAT1-216ENST00000620465 MFSD2AQ8NA29 543 aa5.55□□□□□ -1.52
MALAT1-216ENST00000620465 RBBP8NLQ8NC74 664 aaPredicted RBP5.55□□□□□ -1.52
MALAT1-216ENST00000620465 GIMAP7Q8NHV1 300 aa5.55□□□□□ -1.52
MALAT1-216ENST00000620465 CYB5D2Q8WUJ1 264 aa5.55□□□□□ -1.52
MALAT1-216ENST00000620465 SHDQ96IW2 340 aa5.55□□□□□ -1.52
MALAT1-216ENST00000620465 C1GALT1Q9NS00 363 aa5.55□□□□□ -1.52
MALAT1-216ENST00000620465 SLC22A31A6NKX4 558 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 GSC2O15499 205 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 RAG1P15918 1043 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 ATP2B1P20020 1258 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 GIPRP48546 466 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 ARSHQ5FYA8 562 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 NKAPLQ5M9Q1 402 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 CDCP2Q5VXM1 449 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 RNF43Q68DV7 783 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 NLRC3Q7RTR2 1065 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 ZAR1Q86SH2 424 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 PHACTR4Q8IZ21 702 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 TBC1D32Q96NH3 1257 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 PSMG3-AS1Q96PY0 264 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 MIPEPQ99797 713 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 ANTXR1Q9H6X2 564 aa5.54□□□□□ -1.52
MALAT1-216ENST00000620465 CHURC1-FNTBB4DL54 471 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 NFIAQ12857 509 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 RSPO4Q2I0M5 234 aaPredicted RBP5.53□□□□□ -1.52
MALAT1-216ENST00000620465 TAB3Q8N5C8 712 aaPredicted RBP5.53□□□□□ -1.52
MALAT1-216ENST00000620465 TOP6BLQ8N6T0 577 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 XAGE3Q8WTP9 111 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 ARMC5Q96C12 935 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 ANAPC16Q96DE5 110 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 MFSD14AQ96MC6 490 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 TM9SF2Q99805 663 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 DBNDD2Q9BQY9 259 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 CNNM2Q9H8M5 875 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 ZNF408Q9H9D4 720 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 PRDM10Q9NQV6 1147 aa5.53□□□□□ -1.52
MALAT1-216ENST00000620465 UPK3BL1B0FP48 263 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 UPK3BL2E5RIL1 263 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 DYRK3O43781 588 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 IGLV1-40P01703 118 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 FAM87AP0C7U9 286 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 NME1P15531 152 aaKnown RBP5.52□□□□□ -1.53
MALAT1-216ENST00000620465 FSTP19883 344 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 GUCY2CP25092 1073 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 CYP27A1Q02318 531 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 TNNI3KQ59H18 835 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 ZNF746Q6NUN9 644 aaPredicted RBP5.52□□□□□ -1.53
MALAT1-216ENST00000620465 LETMD1Q6P1Q0 360 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 FBXL6Q8N531 539 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 C19orf47Q8N9M1 422 aaKnown RBP5.52□□□□□ -1.53
MALAT1-216ENST00000620465 GATA6Q92908 595 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 CCDC74BQ96LY2 380 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 DRC1Q96MC2 740 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 DUSP23Q9BVJ7 150 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 MRVI1Q9Y6F6 885 aa5.52□□□□□ -1.53
MALAT1-216ENST00000620465 TNFRSF10CO14798 259 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 RGS13O14921 159 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 STK10O94804 968 aaKnown RBP5.51□□□□□ -1.53
MALAT1-216ENST00000620465 SLITRK5O94991 958 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 ADMP35318 185 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 CCNFP41002 786 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 CPSF6Q16630 551 aaKnown RBP eCLIP5.51□□□□□ -1.53
MALAT1-216ENST00000620465 FAM169BQ8N8A8 192 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 KIF2CQ99661 725 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 METTL22Q9BUU2 404 aaPredicted RBP5.51□□□□□ -1.53
MALAT1-216ENST00000620465 PRKAG3Q9UGI9 489 aa5.51□□□□□ -1.53
MALAT1-216ENST00000620465 SMAD7O15105 426 aaKnown RBP5.5□□□□□ -1.53
MALAT1-216ENST00000620465 LEFTY1O75610 366 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 POLR2BP30876 1174 aaKnown RBP5.5□□□□□ -1.53
MALAT1-216ENST00000620465 GBP1P32455 592 aa5.5□□□□□ -1.53
MALAT1-216ENST00000620465 GTF2F1P35269 517 aaKnown RBP eCLIP5.5□□□□□ -1.535e-52■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms