RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 NBPF3Q9H094 633 aa8.42□□□□□ -1.06
PSMB3-212ENST00000620309 OSBPL5Q9H0X9 879 aaPredicted RBP8.42□□□□□ -1.06
PSMB3-212ENST00000620309 R3HDMLQ9H3Y0 253 aa8.42□□□□□ -1.06
PSMB3-212ENST00000620309 DCP1AQ9NPI6 582 aaPredicted RBP8.42□□□□□ -1.06
PSMB3-212ENST00000620309 PICK1Q9NRD5 415 aa8.42□□□□□ -1.06
PSMB3-212ENST00000620309 ARPP21Q9UBL0 812 aaPredicted RBP8.42□□□□□ -1.06
PSMB3-212ENST00000620309 HERC5Q9UII4 1024 aaKnown RBP8.42□□□□□ -1.06
PSMB3-212ENST00000620309 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
PSMB3-212ENST00000620309 SLC4A4Q9Y6R1 1079 aa8.42□□□□□ -1.06
PSMB3-212ENST00000620309 MYH6P13533 1939 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 HSPA4P34932 840 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 RBM25P49756 843 aaKnown RBP8.41□□□□□ -1.06
PSMB3-212ENST00000620309 ALX1Q15699 326 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 TTC6Q86TZ1 520 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 IFNL3Q8IZI9 196 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 KCNB2Q92953 911 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 TBC1D32Q96NH3 1257 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 USP26Q9BXU7 913 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.41□□□□□ -1.06
PSMB3-212ENST00000620309 ATP8A2Q9NTI2 1148 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 PI4KBQ9UBF8 816 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 FAM198AQ9UFP1 575 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 PALD1Q9ULE6 856 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 TAF6LQ9Y6J9 622 aa8.41□□□□□ -1.06
PSMB3-212ENST00000620309 U3KPZ7 1027 aaPredicted RBP8.41□□□□□ -1.06
PSMB3-212ENST00000620309 MANSC4A6NHS7 340 aaPredicted RBP8.4□□□□□ -1.06
PSMB3-212ENST00000620309 PATL2C9JE40 543 aaKnown RBP8.4□□□□□ -1.06
PSMB3-212ENST00000620309 UBE2Q2LH0YL09 131 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 FKTNO75072 461 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 ALDH1A1P00352 501 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.06
PSMB3-212ENST00000620309 CYP21A2P08686 494 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 TDO2P48775 406 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 INHBEP58166 350 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 MAP3K9P80192 1104 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 EVX2Q03828 476 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 NECTIN1Q15223 517 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 KIAA1211Q6ZU35 1233 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 TBC1D10CQ8IV04 446 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 MAPKAPK5Q8IW41 473 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 SLC17A8Q8NDX2 589 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 ARMC5Q96C12 935 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 TEPSINQ96N21 525 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 NACAP1Q9BZK3 213 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 NAPBQ9H115 298 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 PRO3102Q9H379 93 aa8.4□□□□□ -1.06
PSMB3-212ENST00000620309 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.4□□□□□ -1.06
PSMB3-212ENST00000620309 PLIN4Q96Q06 1357 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 NEDD4P46934 1319 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 SLC27A2O14975 620 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 FGAP02671 866 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 EN2P19622 333 aaPredicted RBP8.39□□□□□ -1.07
PSMB3-212ENST00000620309 GTF2A2P52657 109 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 VGLL4Q14135 290 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 SBK1Q52WX2 424 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 CREB3L3Q68CJ9 461 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 STOX1Q6ZVD7 989 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 OTOP1Q7RTM1 612 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 ERO1BQ86YB8 467 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.39□□□□□ -1.072e-7■■■■□ 24.5
PSMB3-212ENST00000620309 OPTNQ96CV9 577 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 WNK4Q96J92 1243 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 AS3MTQ9HBK9 375 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 ZNF287Q9HBT7 754 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 GINM1Q9NU53 330 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 ANAPC4Q9UJX5 808 aa8.39□□□□□ -1.07
PSMB3-212ENST00000620309 A0A0G2JMZ2 1700 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 CYP2D7A0A087X1C5 515 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 TBC1D12O60347 775 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 CTNND1O60716 968 aaKnown RBP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 USP2O75604 605 aaPredicted RBP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 SLC3A2P08195 630 aaKnown RBP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 CYP2D6P10635 497 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 MNX1P50219 401 aaPredicted RBP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 ANAPC15P60006 121 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 GABPAQ06546 454 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 PPARAQ07869 468 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 NOL9Q5SY16 702 aaKnown RBP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 SPRYD7Q5W111 196 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 CTR9Q6PD62 1173 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 MOB2Q70IA6 237 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 MIGA2Q7L4E1 593 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 FOXP4Q8IVH2 680 aaPredicted RBP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 RASEFQ8IZ41 740 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 SCYL3Q8IZE3 742 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 STAG1Q8WVM7 1258 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 KIF2CQ99661 725 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 C22orf23Q9BZE7 217 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 EHD4Q9H223 541 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 UPF2Q9HAU5 1272 aaKnown RBP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 MCM9Q9NXL9 1143 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms