RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 RPS6KA4O75676 772 aa34.5■■■■□ 3.11
KHSRP-213ENST00000619396 SLU7O95391 586 aaKnown RBP34.5■■■■□ 3.11
KHSRP-213ENST00000619396 FNBP4Q8N3X1 1017 aaPredicted RBP34.5■■■■□ 3.11
KHSRP-213ENST00000619396 BMP6P22004 513 aa34.49■■■■□ 3.11
KHSRP-213ENST00000619396 SLC10A5Q5PT55 438 aa34.49■■■■□ 3.11
KHSRP-213ENST00000619396 OLFM4Q6UX06 510 aa34.49■■■■□ 3.11
KHSRP-213ENST00000619396 NBPF5PQ86XG9 351 aaPredicted RBP34.49■■■■□ 3.11
KHSRP-213ENST00000619396 SETDB2Q96T68 719 aa34.49■■■■□ 3.11
KHSRP-213ENST00000619396 NACAP1Q9BZK3 213 aa34.49■■■■□ 3.11
KHSRP-213ENST00000619396 TMX1Q9H3N1 280 aa34.49■■■■□ 3.11
KHSRP-213ENST00000619396 DDX41Q9UJV9 622 aaKnown RBP34.49■■■■□ 3.11
KHSRP-213ENST00000619396 NRDCO43847 1150 aa34.48■■■■□ 3.11
KHSRP-213ENST00000619396 GNAT2P19087 354 aa34.48■■■■□ 3.11
KHSRP-213ENST00000619396 DIS3L2Q8IYB7 885 aaKnown RBP34.48■■■■□ 3.11
KHSRP-213ENST00000619396 BCL11BQ9C0K0 894 aaPredicted RBP34.48■■■■□ 3.11
KHSRP-213ENST00000619396 CCNL1Q9UK58 526 aaPredicted RBP34.48■■■■□ 3.11
KHSRP-213ENST00000619396 SERPINC1P01008 464 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 FBXO2Q9UK22 296 aaPredicted RBP34.47■■■■□ 3.11
KHSRP-213ENST00000619396 KCNJ14Q9UNX9 436 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 FOXN1O15353 648 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 TUBB4AP04350 444 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 DYNLL1P63167 89 aaKnown RBP34.47■■■■□ 3.11
KHSRP-213ENST00000619396 PDE4BQ07343 736 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 RTN1Q16799 776 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 SLC51AQ86UW1 340 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 VSTM4Q8IW00 320 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 ZNF384Q8TF68 577 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 FOXP1Q9H334 677 aaPredicted RBP34.47■■■■□ 3.11
KHSRP-213ENST00000619396 FANCLQ9NW38 375 aa34.47■■■■□ 3.11
KHSRP-213ENST00000619396 PTPREP23469 700 aa34.46■■■■□ 3.11
KHSRP-213ENST00000619396 ZNF397Q8NF99 534 aaPredicted RBP34.46■■■■□ 3.11
KHSRP-213ENST00000619396 MTA3Q9BTC8 594 aa34.46■■■■□ 3.11
KHSRP-213ENST00000619396 GNL3LQ9NVN8 582 aaKnown RBP34.46■■■■□ 3.11
KHSRP-213ENST00000619396 CACNA1SQ13698 1873 aa34.46■■■■□ 3.11
KHSRP-213ENST00000619396 ZPR1O75312 459 aa34.46■■■■□ 3.11
KHSRP-213ENST00000619396 WTAPQ15007 396 aa34.46■■■■□ 3.11
KHSRP-213ENST00000619396 SAFBQ15424 915 aaKnown RBP eCLIP34.46■■■■□ 3.11
KHSRP-213ENST00000619396 CCDC93Q567U6 631 aa34.46■■■■□ 3.11
KHSRP-213ENST00000619396 CAVIN4Q5BKX8 364 aa34.46■■■■□ 3.11
KHSRP-213ENST00000619396 RC3H1Q5TC82 1133 aaKnown RBP34.46■■■■□ 3.11
KHSRP-213ENST00000619396 NOL12Q9UGY1 213 aaKnown RBP eCLIP34.46■■■■□ 3.11
KHSRP-213ENST00000619396 V9GYY5 206 aaPredicted RBP34.46■■■■□ 3.11
KHSRP-213ENST00000619396 MAGEB6P1A0A0J9YX57 407 aa34.45■■■■□ 3.11
KHSRP-213ENST00000619396 MINDY4BA8MYZ0 360 aa34.45■■■■□ 3.11
KHSRP-213ENST00000619396 GRIN1Q05586 938 aa34.45■■■■□ 3.11
KHSRP-213ENST00000619396 SPECC1Q5M775 1068 aa34.45■■■■□ 3.11
KHSRP-213ENST00000619396 SYT10Q6XYQ8 523 aa34.45■■■■□ 3.11
KHSRP-213ENST00000619396 CRACR2BQ8N4Y2 399 aaPredicted RBP34.45■■■■□ 3.11
KHSRP-213ENST00000619396 KMT5BQ4FZB7 885 aa34.45■■■■□ 3.1
KHSRP-213ENST00000619396 TRIM22Q8IYM9 498 aa34.45■■■■□ 3.1
KHSRP-213ENST00000619396 GTPBP4Q9BZE4 634 aaKnown RBP34.45■■■■□ 3.1
KHSRP-213ENST00000619396 TFCP2L1Q9NZI6 479 aa34.45■■■■□ 3.1
KHSRP-213ENST00000619396 RPS8P62241 208 aaKnown RBP34.44■■■■□ 3.1
KHSRP-213ENST00000619396 PPARAQ07869 468 aa34.44■■■■□ 3.1
KHSRP-213ENST00000619396 CFAP100Q494V2 611 aa34.44■■■■□ 3.1
KHSRP-213ENST00000619396 ARHGEF1Q92888 912 aaKnown RBP34.44■■■■□ 3.1
KHSRP-213ENST00000619396 NLRP3Q96P20 1036 aa34.44■■■■□ 3.1
KHSRP-213ENST00000619396 RILPL1Q5EBL4 403 aa34.43■■■■□ 3.1
KHSRP-213ENST00000619396 RIOK1Q9BRS2 568 aaKnown RBP34.43■■■■□ 3.1
KHSRP-213ENST00000619396 CYP2D7A0A087X1C5 515 aa34.43■■■■□ 3.1
KHSRP-213ENST00000619396 DEXIO95424 95 aa34.43■■■■□ 3.1
KHSRP-213ENST00000619396 SART3Q15020 963 aaKnown RBP34.43■■■■□ 3.1
KHSRP-213ENST00000619396 NT5DC1Q5TFE4 455 aa34.43■■■■□ 3.1
KHSRP-213ENST00000619396 INTS13Q9NVM9 706 aa34.43■■■■□ 3.1
KHSRP-213ENST00000619396 MORC2Q9Y6X9 1032 aaPredicted RBP34.43■■■■□ 3.1
KHSRP-213ENST00000619396 BAZ2AQ9UIF9 1905 aaKnown RBP34.42■■■■□ 3.1
KHSRP-213ENST00000619396 TMEM232C9JQI7 657 aa34.42■■■■□ 3.1
KHSRP-213ENST00000619396 RCAN1P53805 252 aa34.42■■■■□ 3.1
KHSRP-213ENST00000619396 ELF2Q15723 593 aa34.42■■■■□ 3.1
KHSRP-213ENST00000619396 TMTC2Q8N394 836 aa34.42■■■■□ 3.1
KHSRP-213ENST00000619396 MAN1B1Q9UKM7 699 aa34.42■■■■□ 3.1
KHSRP-213ENST00000619396 NYXQ9GZU5 481 aa34.42■■■■□ 3.1
KHSRP-213ENST00000619396 RTCBQ9Y3I0 505 aaKnown RBP34.42■■■■□ 3.1
KHSRP-213ENST00000619396 SARSP49591 514 aaKnown RBP34.41■■■■□ 3.1
KHSRP-213ENST00000619396 CMTR1Q8N1G2 835 aaKnown RBP34.41■■■■□ 3.1
KHSRP-213ENST00000619396 ZNF579Q8NAF0 562 aaKnown RBP34.41■■■■□ 3.1
KHSRP-213ENST00000619396 POSTNQ15063 836 aa34.4■■■■□ 3.1
KHSRP-213ENST00000619396 HOOK1Q9UJC3 728 aaKnown RBP34.4■■■■□ 3.1
KHSRP-213ENST00000619396 CCP110O43303 1012 aa34.4■■■■□ 3.1
KHSRP-213ENST00000619396 FANCBQ8NB91 859 aa34.4■■■■□ 3.1
KHSRP-213ENST00000619396 PCDHB6Q9Y5E3 794 aa34.4■■■■□ 3.1
KHSRP-213ENST00000619396 COL24A1Q17RW2 1714 aa34.4■■■■□ 3.1
KHSRP-213ENST00000619396 CCDC196A0A1B0GTZ2 297 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 NR5A1Q13285 461 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 FBXO33Q7Z6M2 555 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 CCDC82Q8N4S0 544 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 JAG2Q9Y219 1238 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 NHSQ6T4R5 1651 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 TOP1P11387 765 aaKnown RBP34.39■■■■□ 3.1
KHSRP-213ENST00000619396 ETF1P62495 437 aaKnown RBP34.39■■■■□ 3.1
KHSRP-213ENST00000619396 ZNF654Q8IZM8 581 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 SERTAD1Q9UHV2 236 aa34.39■■■■□ 3.1
KHSRP-213ENST00000619396 ERICH2A1L162 156 aa34.38■■■■□ 3.09
KHSRP-213ENST00000619396 FBXO38Q6PIJ6 1188 aa34.38■■■■□ 3.09
KHSRP-213ENST00000619396 RNF41Q9H4P4 317 aaPredicted RBP34.38■■■■□ 3.09
KHSRP-213ENST00000619396 SRPRBQ9Y5M8 271 aaKnown RBP34.38■■■■□ 3.09
KHSRP-213ENST00000619396 THSD7AQ9UPZ6 1657 aa34.38■■■■□ 3.09
KHSRP-213ENST00000619396 POLR2DO15514 142 aaKnown RBP34.38■■■■□ 3.09
KHSRP-213ENST00000619396 PRR29P0C7W0 189 aa34.38■■■■□ 3.09
KHSRP-213ENST00000619396 EVX2Q03828 476 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms