RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 CCDC15Q0P6D6 951 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 JADE2Q9NQC1 790 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 DAAM1Q9Y4D1 1078 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 ATP11AP98196 1134 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 CCDC38Q502W7 563 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 MRPL40Q9NQ50 206 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 SSH2Q76I76 1423 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 KRT3P12035 628 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 SLC12A2P55011 1212 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 PPP4R1Q8TF05 950 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 ZNF215Q9UL58 517 aaPredicted RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 EFCAB14O75071 495 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 FAM204AQ9H8W3 233 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 HYOU1Q9Y4L1 999 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 POLR3AO14802 1390 aaPredicted RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 GPATCH8Q9UKJ3 1502 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 N4BP3O15049 544 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 DZIP3Q86Y13 1208 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 ELP1O95163 1332 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 FOXP2O15409 715 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 TEX2Q8IWB9 1127 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 CNBD1Q8NA66 436 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 Q9H521 79 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 TPD52P55327 224 aaPredicted RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 METTL14Q9HCE5 456 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 PRPF6O94906 941 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 PRPSAP1Q14558 356 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 TMEM132EQ6IEE7 984 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 USP48Q86UV5 1035 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 EXOC6Q8TAG9 804 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 PSPC1Q8WXF1 523 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 RABGGTAQ92696 567 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 STMN2Q93045 179 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 EHD2Q9NZN4 543 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 TACC3Q9Y6A5 838 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 NLRP1Q9C000 1473 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 ZBTB8OSQ8IWT0 167 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 PUF60Q9UHX1 559 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 RNASELQ05823 741 aaKnown RBP8□□□□□ -1.13
CSMD2-210ENST00000619121 SNX21Q969T3 373 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 GGA1Q9UJY5 639 aa8□□□□□ -1.13
CSMD2-210ENST00000619121 PREPLQ4J6C6 727 aaPredicted RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 TRIM45Q9H8W5 580 aaPredicted RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 EVI5O60447 810 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 HADHQ16836 314 aaKnown RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 DHX32Q7L7V1 743 aaKnown RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 SMARCAL1Q9NZC9 954 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 DCPSQ96C86 337 aaKnown RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 ZNF212Q9UDV6 495 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CTAGE15A4D2H0 777 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CTAGE8P0CG41 777 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 RASSF7Q02833 373 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 SLC9C1Q4G0N8 1177 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CTAGE6Q86UF2 777 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CTAGE4Q8IX94 777 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 ARPP21Q9UBL0 812 aaPredicted RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 UBAP1LF5GYI3 381 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 TFDP1Q14186 410 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CDCA7LQ96GN5 454 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 BOLA2Q9H3K6 86 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 THEGQ9P2T0 379 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 MACROD2A1Z1Q3 448 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 MECOMQ03112 1051 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 ORC2Q13416 577 aaPredicted RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 IFT20Q8IY31 132 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CACTINQ8WUQ7 758 aaKnown RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 PSMA3P25788 255 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 PLS1Q14651 629 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CCDC62Q6P9F0 684 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 SPZ1Q9BXG8 430 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 MEIS1O00470 390 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 PYGLP06737 847 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 SATB1Q01826 763 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 DDX50Q9BQ39 737 aaKnown RBP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 ANAPC5Q9UJX4 755 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 NIP7Q9Y221 180 aaKnown RBP eCLIP7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CA4P22748 312 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CCDC170Q8IYT3 715 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 DRC3Q9H069 523 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 TFCP2L1Q9NZI6 479 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 UBE4AQ14139 1066 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 DNM3Q9UQ16 869 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 AKNAD1Q5T1N1 836 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 TUBB6Q9BUF5 446 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 PCDHB13Q9Y5F0 798 aa7.99□□□□□ -1.13
CSMD2-210ENST00000619121 CETN3O15182 167 aa7.98□□□□□ -1.13
CSMD2-210ENST00000619121 SLC26A4O43511 780 aa7.98□□□□□ -1.13
CSMD2-210ENST00000619121 IDEP14735 1019 aa7.98□□□□□ -1.13
CSMD2-210ENST00000619121 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
CSMD2-210ENST00000619121 NOP14P78316 857 aaKnown RBP7.98□□□□□ -1.13
CSMD2-210ENST00000619121 CDC37Q16543 378 aaPredicted RBP7.98□□□□□ -1.13
CSMD2-210ENST00000619121 AK8Q96MA6 479 aa7.98□□□□□ -1.13
CSMD2-210ENST00000619121 FOSP01100 380 aaPredicted RBP7.98□□□□□ -1.13
CSMD2-210ENST00000619121 ARL1P40616 181 aaPredicted RBP7.98□□□□□ -1.13
CSMD2-210ENST00000619121 MID2Q9UJV3 735 aa7.98□□□□□ -1.13
CSMD2-210ENST00000619121 PCDHB8Q9UN66 801 aa7.98□□□□□ -1.13
CSMD2-210ENST00000619121 TTF2Q9UNY4 1162 aaKnown RBP7.98□□□□□ -1.13
CSMD2-210ENST00000619121 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms