RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 MAP3K12Q12852 859 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 CREBRFQ8IUR6 639 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 TRIML1Q8N9V2 468 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 ZNF579Q8NAF0 562 aaKnown RBP23.3■■□□□ 1.32
NEK3-208ENST00000618534 SRPRBQ9Y5M8 271 aaKnown RBP23.3■■□□□ 1.32
NEK3-208ENST00000618534 CCDC66A2RUB6 948 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 PDE8AO60658 829 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 DEXIO95424 95 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 MTF1Q14872 753 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 KARSQ15046 597 aaKnown RBP23.3■■□□□ 1.32
NEK3-208ENST00000618534 TEX35Q5T0J7 233 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 CRACR2BQ8N4Y2 399 aaPredicted RBP23.3■■□□□ 1.32
NEK3-208ENST00000618534 CSRNP2Q9H175 543 aa23.3■■□□□ 1.32
NEK3-208ENST00000618534 DOCK2Q92608 1830 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 PLCD1P51178 756 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 ANKRD36CQ5JPF3 1778 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 TDO2P48775 406 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 NR1I3Q14994 352 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 LCORLQ8N3X6 602 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 STAG1Q8WVM7 1258 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 MRPL44Q9H9J2 332 aaKnown RBP23.29■■□□□ 1.32
NEK3-208ENST00000618534 ARAP2Q8WZ64 1704 aa23.29■■□□□ 1.32
NEK3-208ENST00000618534 SART3Q15020 963 aaKnown RBP23.28■■□□□ 1.32
NEK3-208ENST00000618534 CC2D1AQ6P1N0 951 aaPredicted RBP23.28■■□□□ 1.32
NEK3-208ENST00000618534 DHX58Q96C10 678 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 A0A1B0GTH6 734 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 SASH3O75995 380 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 TBC1D8O95759 1140 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 CYP2C19P33261 490 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 RSRC2Q7L4I2 434 aaKnown RBP23.28■■□□□ 1.32
NEK3-208ENST00000618534 GPR161Q8N6U8 529 aaKnown RBP23.28■■□□□ 1.32
NEK3-208ENST00000618534 SPATA20Q8TB22 786 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 NUP133Q8WUM0 1156 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 CABP5Q9NP86 173 aa23.28■■□□□ 1.32
NEK3-208ENST00000618534 LRP5O75197 1615 aa23.27■■□□□ 1.32
NEK3-208ENST00000618534 MROH5Q6ZUA9 1318 aa23.27■■□□□ 1.32
NEK3-208ENST00000618534 KANK3Q6NY19 840 aa23.27■■□□□ 1.32
NEK3-208ENST00000618534 SLC4A4Q9Y6R1 1079 aa23.27■■□□□ 1.32
NEK3-208ENST00000618534 SOWAHDA6NJG2 315 aa23.27■■□□□ 1.31
NEK3-208ENST00000618534 POLR3GO15318 223 aaPredicted RBP23.27■■□□□ 1.31
NEK3-208ENST00000618534 TEX33O43247 280 aa23.27■■□□□ 1.31
NEK3-208ENST00000618534 BRINP3Q76B58 766 aa23.27■■□□□ 1.31
NEK3-208ENST00000618534 CEP131Q9UPN4 1083 aa23.27■■□□□ 1.31
NEK3-208ENST00000618534 ERICH2A1L162 156 aa23.26■■□□□ 1.31
NEK3-208ENST00000618534 FAM205CA6NFA0 338 aa23.26■■□□□ 1.31
NEK3-208ENST00000618534 SLC5A1P13866 664 aa23.26■■□□□ 1.31
NEK3-208ENST00000618534 ERCC5P28715 1186 aaPredicted RBP23.26■■□□□ 1.31
NEK3-208ENST00000618534 ZNF654Q8IZM8 581 aa23.26■■□□□ 1.31
NEK3-208ENST00000618534 IRX2Q9BZI1 471 aaPredicted RBP23.26■■□□□ 1.31
NEK3-208ENST00000618534 A0A087X0B3 334 aa23.25■■□□□ 1.31
NEK3-208ENST00000618534 AKR1B15C9JRZ8 316 aaPredicted RBP23.25■■□□□ 1.31
NEK3-208ENST00000618534 APTXQ7Z2E3 356 aaKnown RBP23.25■■□□□ 1.31
NEK3-208ENST00000618534 FANCBQ8NB91 859 aa23.25■■□□□ 1.31
NEK3-208ENST00000618534 CCDC12Q8WUD4 166 aaPredicted RBP23.25■■□□□ 1.31
NEK3-208ENST00000618534 SHISA4Q96DD7 197 aa23.25■■□□□ 1.31
NEK3-208ENST00000618534 ATP8B1O43520 1251 aa23.25■■□□□ 1.31
NEK3-208ENST00000618534 NACAP1Q9BZK3 213 aa23.25■■□□□ 1.31
NEK3-208ENST00000618534 ZBTB1Q9Y2K1 713 aa23.25■■□□□ 1.31
NEK3-208ENST00000618534 CCDC196A0A1B0GTZ2 297 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 KLHL10Q6JEL2 608 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 UBXN6Q9BZV1 441 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 CCDC175P0C221 793 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 CD44P16070 742 aaKnown RBP23.24■■□□□ 1.31
NEK3-208ENST00000618534 CASP1P29466 404 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 AFMP43652 599 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 STX17P56962 302 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 MIGA1Q8NAN2 632 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 SLC4A9Q96Q91 983 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 PANX2Q96RD6 677 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 PARD6BQ9BYG5 372 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.24■■□□□ 1.31
NEK3-208ENST00000618534 NUP98P52948 1817 aa23.24■■□□□ 1.31
NEK3-208ENST00000618534 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
NEK3-208ENST00000618534 EVA1CP58658 441 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 RAD9BQ6WBX8 426 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 RABGGTAQ92696 567 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 EPSTI1Q96J88 318 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 SYNRGQ9UMZ2 1314 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 RBL2Q08999 1139 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 GOLGA1Q92805 767 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 LZTFL1Q9NQ48 299 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 PNPLA7Q6ZV29 1317 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 BCORQ6W2J9 1755 aa23.23■■□□□ 1.31
NEK3-208ENST00000618534 MYH6P13533 1939 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 A0A0U1RQJ8 604 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 GNAT2P19087 354 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 EARS2Q5JPH6 523 aaKnown RBP23.22■■□□□ 1.31
NEK3-208ENST00000618534 SPATA1Q5VX52 437 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 IGSF22Q8N9C0 903 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 ATRIPQ8WXE1 791 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 CCDC34Q96HJ3 373 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 AATFQ9NY61 560 aaKnown RBP eCLIP23.22■■□□□ 1.31
NEK3-208ENST00000618534 TRIM75PA6NK02 468 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 TMTC2Q8N394 836 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 CPLX3Q8WVH0 158 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 UBAC1Q9BSL1 405 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 VPS54Q9P1Q0 977 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 ADGRG1Q9Y653 693 aa23.22■■□□□ 1.31
NEK3-208ENST00000618534 OAS2P29728 719 aaKnown RBP23.21■■□□□ 1.31
NEK3-208ENST00000618534 CUL4BQ13620 913 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms