RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 DMGDHQ9UI17 866 aaKnown RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 LCMT1Q9UIC8 334 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 MCM8Q9UJA3 840 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 BLOC1S6Q9UL45 172 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 AKAP2Q9Y2D5 859 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 USP20Q9Y2K6 914 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 FRMD4BQ9Y2L6 1034 aa4.08□□□□□ -1.76
SMC5-204ENST00000618375 RTCBQ9Y3I0 505 aaKnown RBP4.08□□□□□ -1.76
SMC5-204ENST00000618375 PTPN23Q9H3S7 1636 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 CAMSAP2Q08AD1 1489 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 GAPVD1Q14C86 1478 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 KIF15Q9NS87 1388 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 ATXN2Q99700 1313 aaKnown RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 A0A087WUV0 522 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 EIF3CLB5ME19 914 aaKnown RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 DYRK3O43781 588 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 NEBLO76041 1014 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 MAP3K6O95382 1288 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 PSAPP07602 524 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 NBPF7P0C2Y1 421 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 VDRP11473 427 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 SELPP16109 830 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 PECAM1P16284 738 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 NAP1L1P55209 391 aaKnown RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 PSMC1P62191 440 aaKnown RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 DDR1Q08345 913 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 NEXNQ0ZGT2 675 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 TBC1D25Q3MII6 688 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 PERM1Q5SV97 790 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 CFAP70Q5T0N1 1121 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 TTC19Q6DKK2 380 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 GDF6Q6KF10 455 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 GBP6Q6ZN66 633 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 NFXL1Q6ZNB6 911 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 SDCCAG8Q86SQ7 713 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 ANKRD18AQ8IVF6 992 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 FMR1NBQ8N0W7 255 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 SAMD3Q8N6K7 520 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 CCDC112Q8NEF3 446 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 NEK11Q8NG66 645 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 LENG1Q96BZ8 264 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 DDX11Q96FC9 970 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 PLEKHG4BQ96PX9 1271 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 EIF3CQ99613 913 aaKnown RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 BAG1Q99933 345 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 THUMPD2Q9BTF0 503 aaKnown RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 POLR3CQ9BUI4 534 aaPredicted RBP4.07□□□□□ -1.76
SMC5-204ENST00000618375 TSPY26PQ9H489 355 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 TRPV5Q9NQA5 729 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 ZFATQ9P243 1243 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 CLIP2Q9UDT6 1046 aa4.07□□□□□ -1.76
SMC5-204ENST00000618375 GCC2Q8IWJ2 1684 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 SYNMO15061 1565 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 PLB1Q6P1J6 1458 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 HFM1A2PYH4 1435 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 CCDC171Q6TFL3 1326 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 MYBBP1AQ9BQG0 1328 aaKnown RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 A0A1B0GUA9 196 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 IPO5O00410 1097 aaKnown RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 EXOC5O00471 708 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 ZSCAN9O15535 394 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 RTN2O75298 545 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 CYP2E1P05181 493 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 PNMA6AP0CW24 399 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 RAB27AP51159 221 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 GPLD1P80108 840 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 PLAURQ03405 335 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 DEUP1Q05D60 604 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 IFT88Q13099 833 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 PSMD2Q13200 908 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 ADGRE1Q14246 886 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 TAF7Q15545 349 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 SWI5Q1ZZU3 235 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 TSNAXIP1Q2TAA8 658 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 PREPLQ4J6C6 727 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 PRSS36Q5K4E3 855 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 NKAPLQ5M9Q1 402 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 ACBD5Q5T8D3 534 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 WDR78Q5VTH9 848 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 ZKSCAN2Q63HK3 967 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 RCSD1Q6JBY9 416 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 FBXO38Q6PIJ6 1188 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 KIAA1328Q86T90 577 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 DTWD1Q8N5C7 304 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 PMFBP1Q8TBY8 1022 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 MIPOL1Q8TD10 442 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 TRPM4Q8TD43 1214 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 MICAL1Q8TDZ2 1067 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 SMCR8Q8TEV9 937 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 HDAC7Q8WUI4 952 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 MYO19Q96H55 970 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 NSUN5Q96P11 429 aaKnown RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 LPIN3Q9BQK8 851 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 MKNK1Q9BUB5 465 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 C22orf23Q9BZE7 217 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 TRIM7Q9C029 511 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 RMI1Q9H9A7 625 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 ARGLU1Q9NWB6 273 aaPredicted RBP4.06□□□□□ -1.76
SMC5-204ENST00000618375 FRRS1LQ9P0K9 344 aa4.06□□□□□ -1.76
SMC5-204ENST00000618375 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms