RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PSMA7O14818 248 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 DDAH1O94760 285 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 UBASH3AP57075 661 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 RFX7Q2KHR2 1363 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 N4BP3O15049 544 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 HOOK2Q96ED9 719 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 COA1Q9GZY4 146 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 TNFAIP1Q13829 316 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 NONOQ15233 471 aaKnown RBP eCLIP15.73■□□□□ 0.11
CIITA-213ENST00000618327 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
CIITA-213ENST00000618327 KRT25Q7Z3Z0 450 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 KIAA1328Q86T90 577 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.73■□□□□ 0.11
CIITA-213ENST00000618327 SEPT11Q9NVA2 429 aaKnown RBP15.73■□□□□ 0.11
CIITA-213ENST00000618327 PLEKHG2Q9H7P9 1386 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 H7C1D1 291 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 ZSCAN12O43309 604 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 YEATS4O95619 227 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 ADCY7P51828 1080 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 PLIN2Q99541 437 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
CIITA-213ENST00000618327 PDCL2Q8N4E4 241 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 TCP10L2B9ZVM9 353 aa15.73■□□□□ 0.11
CIITA-213ENST00000618327 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
CIITA-213ENST00000618327 FCHSD1Q86WN1 690 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 CLSTN2Q9H4D0 955 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 CCNT1O60563 726 aaKnown RBP15.72■□□□□ 0.11
CIITA-213ENST00000618327 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 SPAG1Q07617 926 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 TCERG1LQ5VWI1 586 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 ERLIN1O75477 346 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 FBXO18Q8NFZ0 1043 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 ZSWIM5Q9P217 1185 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 MYO6Q9UM54 1294 aa15.72■□□□□ 0.11
CIITA-213ENST00000618327 ABCC12Q96J65 1359 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 KLRF2D3W0D1 207 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 EIF3JO75822 258 aaKnown RBP15.71■□□□□ 0.11
CIITA-213ENST00000618327 PRDX5P30044 214 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 SCARF1Q14162 830 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 SF3B3Q15393 1217 aaKnown RBP15.71■□□□□ 0.11
CIITA-213ENST00000618327 PTPN14Q15678 1187 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 CCDC93Q567U6 631 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 NOSTRINQ8IVI9 506 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 SYCP3Q8IZU3 236 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 NSUN7Q8NE18 718 aaKnown RBP15.71■□□□□ 0.11
CIITA-213ENST00000618327 RFX5P48382 616 aaPredicted RBP15.71■□□□□ 0.11
CIITA-213ENST00000618327 PLCD1P51178 756 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 USP28Q96RU2 1077 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 KIF1AQ12756 1690 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 CNTNAP4Q9C0A0 1308 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 SPA17Q15506 151 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 SPECC1Q5M775 1068 aa15.71■□□□□ 0.11
CIITA-213ENST00000618327 LRRC47Q8N1G4 583 aaKnown RBP15.71■□□□□ 0.11
CIITA-213ENST00000618327 RPAP1Q9BWH6 1393 aaPredicted RBP15.71■□□□□ 0.11
CIITA-213ENST00000618327 REXO1Q8N1G1 1221 aaKnown RBP15.71■□□□□ 0.1
CIITA-213ENST00000618327 CTAGE1Q96RT6 745 aa15.71■□□□□ 0.1
CIITA-213ENST00000618327 CYP2D7A0A087X1C5 515 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 KIF2AO00139 706 aaPredicted RBP15.7■□□□□ 0.1
CIITA-213ENST00000618327 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 GOPCQ9HD26 462 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 SH2B2O14492 632 aaPredicted RBP15.7■□□□□ 0.1
CIITA-213ENST00000618327 POLR2DO15514 142 aaKnown RBP15.7■□□□□ 0.1
CIITA-213ENST00000618327 LARGE1O95461 756 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 NTSR2O95665 410 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 USP17L8P0C7I0 530 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 CD209Q9NNX6 404 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 ZNF202O95125 648 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 GOLGA8HP0CJ92 632 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 LIG1P18858 919 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 INTS5Q6P9B9 1019 aaKnown RBP15.7■□□□□ 0.1
CIITA-213ENST00000618327 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
CIITA-213ENST00000618327 SMCO2A6NFE2 343 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 SCG2P13521 617 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 LUZP1Q86V48 1076 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 TMOD4Q9NZQ9 345 aa15.7■□□□□ 0.1
CIITA-213ENST00000618327 USP8P40818 1118 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 FERMT2Q96AC1 680 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 FAM84BQ96KN1 310 aaPredicted RBP15.69■□□□□ 0.1
CIITA-213ENST00000618327 CCDC17Q96LX7 622 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 BTBD18B2RXH4 712 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 TXKP42681 527 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 CCDC150Q8NCX0 1101 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 BRIP1Q9BX63 1249 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 STX17P56962 302 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 ICA1Q05084 483 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 TMED8Q6PL24 325 aaPredicted RBP15.69■□□□□ 0.1
CIITA-213ENST00000618327 SWAP70Q9UH65 585 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 SERPINB13Q9UIV8 391 aa15.69■□□□□ 0.1
CIITA-213ENST00000618327 ZNF445P59923 1031 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 USH1GQ495M9 461 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 GTPBP4Q9BZE4 634 aaKnown RBP15.68■□□□□ 0.1
CIITA-213ENST00000618327 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
CIITA-213ENST00000618327 LIFRP42702 1097 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 CETN1Q12798 172 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 TAF3Q5VWG9 929 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 ADALQ6DHV7 355 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms