RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 SHROOM1Q2M3G4 852 aaPredicted RBP22.61■■□□□ 1.21
SUSD3-205ENST00000617293 CERKLQ49MI3 558 aaPredicted RBP22.61■■□□□ 1.21
SUSD3-205ENST00000617293 CTR9Q6PD62 1173 aa22.61■■□□□ 1.21
SUSD3-205ENST00000617293 PHIPQ8WWQ0 1821 aa22.61■■□□□ 1.21
SUSD3-205ENST00000617293 PATL2C9JE40 543 aaKnown RBP22.6■■□□□ 1.21
SUSD3-205ENST00000617293 NEFLP07196 543 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 SHMT1P34896 483 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 GABPAQ06546 454 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 SPP2Q13103 211 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 C12orf60Q5U649 245 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 ZNF280CQ8ND82 737 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 DYNLL2Q96FJ2 89 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 CFHR5Q9BXR6 569 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 AS3MTQ9HBK9 375 aa22.6■■□□□ 1.21
SUSD3-205ENST00000617293 A0A0G2JLL6 359 aaPredicted RBP22.59■■□□□ 1.21
SUSD3-205ENST00000617293 SMIM22K7EJ46 135 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 GPR25O00155 361 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 GH2P01242 217 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 CRHR2Q13324 411 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 TAF1CQ15572 869 aaPredicted RBP22.59■■□□□ 1.21
SUSD3-205ENST00000617293 GIMAP6Q6P9H5 292 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 CCDC129Q6ZRS4 1044 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 PRRT2Q7Z6L0 340 aaPredicted RBP22.59■■□□□ 1.21
SUSD3-205ENST00000617293 TBC1D2Q9BYX2 928 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 GINM1Q9NU53 330 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 ARPP21Q9UBL0 812 aaPredicted RBP22.59■■□□□ 1.21
SUSD3-205ENST00000617293 ZBTB21Q9ULJ3 1066 aa22.59■■□□□ 1.21
SUSD3-205ENST00000617293 TDO2P48775 406 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 MOGSQ13724 837 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 ABCB5Q2M3G0 1257 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 GADL1Q6ZQY3 521 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 FASTKD5Q7L8L6 764 aaKnown RBP22.58■■□□□ 1.21
SUSD3-205ENST00000617293 TICAM2Q86XR7 235 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 SLC44A5Q8NCS7 719 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 FAM227BQ96M60 508 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 ZFYVE28Q9HCC9 887 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 CABP5Q9NP86 173 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 HELLSQ9NRZ9 838 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 SWAP70Q9UH65 585 aa22.58■■□□□ 1.21
SUSD3-205ENST00000617293 MINDY4BA8MYZ0 360 aa22.57■■□□□ 1.2
SUSD3-205ENST00000617293 PDHXO00330 501 aa22.57■■□□□ 1.2
SUSD3-205ENST00000617293 ANKRD23Q86SG2 305 aa22.57■■□□□ 1.2
SUSD3-205ENST00000617293 IFNL3Q8IZI9 196 aa22.57■■□□□ 1.2
SUSD3-205ENST00000617293 ZNF296Q8WUU4 475 aaPredicted RBP22.57■■□□□ 1.2
SUSD3-205ENST00000617293 NACAP1Q9BZK3 213 aa22.57■■□□□ 1.2
SUSD3-205ENST00000617293 EPB41L4AQ9HCS5 686 aaPredicted RBP22.57■■□□□ 1.2
SUSD3-205ENST00000617293 ZCCHC17Q9NP64 241 aaKnown RBP22.57■■□□□ 1.2
SUSD3-205ENST00000617293 MPHOSPH10O00566 681 aaKnown RBP22.56■■□□□ 1.2
SUSD3-205ENST00000617293 SDSP20132 328 aa22.56■■□□□ 1.2
SUSD3-205ENST00000617293 NMIQ13287 307 aaPredicted RBP22.56■■□□□ 1.2
SUSD3-205ENST00000617293 RAB3GAP1Q15042 981 aa22.56■■□□□ 1.2
SUSD3-205ENST00000617293 MCMDC2Q4G0Z9 681 aa22.56■■□□□ 1.2
SUSD3-205ENST00000617293 SBK1Q52WX2 424 aa22.56■■□□□ 1.2
SUSD3-205ENST00000617293 WDR18Q9BV38 432 aa22.56■■□□□ 1.2
SUSD3-205ENST00000617293 PTPRFP10586 1907 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 A0A0D9SFI3 127 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 CDK8P49336 464 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 NOM1Q5C9Z4 860 aaKnown RBP22.55■■□□□ 1.2
SUSD3-205ENST00000617293 TTC22Q5TAA0 569 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 GPAT2Q6NUI2 795 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 CENPQQ7L2Z9 268 aaPredicted RBP22.55■■□□□ 1.2
SUSD3-205ENST00000617293 TNS4Q8IZW8 715 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 STK11IPQ8N1F8 1099 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 TAOK2Q9UL54 1235 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 MYH8P13535 1937 aa22.55■■□□□ 1.2
SUSD3-205ENST00000617293 FKTNO75072 461 aa22.54■■□□□ 1.2
SUSD3-205ENST00000617293 HMGCS2P54868 508 aa22.54■■□□□ 1.2
SUSD3-205ENST00000617293 C16orf86Q6ZW13 317 aa22.54■■□□□ 1.2
SUSD3-205ENST00000617293 CCDC136Q96JN2 1154 aa22.54■■□□□ 1.2
SUSD3-205ENST00000617293 NAPBQ9H115 298 aa22.54■■□□□ 1.2
SUSD3-205ENST00000617293 GSPT1P15170 499 aaKnown RBP22.53■■□□□ 1.2
SUSD3-205ENST00000617293 BACE1P56817 501 aa22.53■■□□□ 1.2
SUSD3-205ENST00000617293 DGKZQ13574 1117 aa22.53■■□□□ 1.2
SUSD3-205ENST00000617293 MTMR2Q13614 643 aa22.53■■□□□ 1.2
SUSD3-205ENST00000617293 USP17L10C9JJH3 530 aa22.52■■□□□ 1.2
SUSD3-205ENST00000617293 SEPT2Q15019 361 aa22.52■■□□□ 1.2
SUSD3-205ENST00000617293 VPS53Q5VIR6 699 aa22.52■■□□□ 1.2
SUSD3-205ENST00000617293 CWC27Q6UX04 472 aaKnown RBP22.52■■□□□ 1.2
SUSD3-205ENST00000617293 DIAPH3Q9NSV4 1193 aa22.52■■□□□ 1.2
SUSD3-205ENST00000617293 C19orf81C9J6K1 198 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 HIP1O00291 1037 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 TLR2O60603 784 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 AKR1B1P15121 316 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 GUCY1A2P33402 732 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 SH3D19Q5HYK7 790 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 TREML2Q5T2D2 321 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 PROCA1Q8NCQ7 364 aaPredicted RBP22.51■■□□□ 1.19
SUSD3-205ENST00000617293 CCDC17Q96LX7 622 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 MKNK2Q9HBH9 465 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 TMOD4Q9NZQ9 345 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 AGTPBP1Q9UPW5 1226 aa22.51■■□□□ 1.19
SUSD3-205ENST00000617293 CYP2C8P10632 490 aa22.5■■□□□ 1.19
SUSD3-205ENST00000617293 SP3Q02447 781 aa22.5■■□□□ 1.19
SUSD3-205ENST00000617293 TMEM179Q6ZVK1 233 aa22.5■■□□□ 1.19
SUSD3-205ENST00000617293 ZNF589Q86UQ0 364 aaPredicted RBP22.5■■□□□ 1.19
SUSD3-205ENST00000617293 PARK7Q99497 189 aaKnown RBP22.5■■□□□ 1.19
SUSD3-205ENST00000617293 FEZ1Q99689 392 aa22.5■■□□□ 1.19
SUSD3-205ENST00000617293 FOXP2O15409 715 aa22.49■■□□□ 1.19
SUSD3-205ENST00000617293 ZYXQ15942 572 aaKnown RBP22.49■■□□□ 1.19
SUSD3-205ENST00000617293 ACER1Q8TDN7 264 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms