RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 IQCDQ96DY2 449 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 MRRFQ96E11 262 aaKnown RBP20.97■□□□□ 0.95
SPAST-203ENST00000615843 RAPGEF6Q8TEU7 1601 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 ASIC3Q9UHC3 531 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 FRMD4BQ9Y2L6 1034 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 NDUFB9Q9Y6M9 179 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 PHLPP2Q6ZVD8 1323 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 NBPF14Q5TI25 921 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 PEX26Q7Z412 305 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.96■□□□□ 0.95
SPAST-203ENST00000615843 SFMBT2Q5VUG0 894 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 SYCE1Q8N0S2 351 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 ZNF274Q96GC6 653 aaPredicted RBP20.96■□□□□ 0.95
SPAST-203ENST00000615843 TRAPPC8Q9Y2L5 1435 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
SPAST-203ENST00000615843 HHATQ5VTY9 493 aa20.96■□□□□ 0.95
SPAST-203ENST00000615843 FAM207AQ9NSI2 230 aaPredicted RBP20.96■□□□□ 0.95
SPAST-203ENST00000615843 CLUL1Q15846 466 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 RRAGAQ7L523 313 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 RPAINQ86UA6 219 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 LRRC59Q96AG4 307 aaKnown RBP20.95■□□□□ 0.94
SPAST-203ENST00000615843 DSCC1Q9BVC3 393 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 KCNJ18B7U540 433 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 RGS16O15492 202 aaPredicted RBP20.95■□□□□ 0.94
SPAST-203ENST00000615843 PFKFB2O60825 505 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 CLCN6P51797 869 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 NDUFA8P51970 172 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 KCNJ12Q14500 433 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 CCDC170Q8IYT3 715 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 EXOC4Q96A65 974 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 FAN1Q9Y2M0 1017 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 RNF40O75150 1001 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 ARID4AP29374 1257 aaPredicted RBP20.95■□□□□ 0.94
SPAST-203ENST00000615843 SNCBQ16143 134 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 VPS52Q8N1B4 723 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 KIF3CO14782 793 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 HOXB7P09629 217 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 SUCLG2Q96I99 432 aa20.95■□□□□ 0.94
SPAST-203ENST00000615843 FLOT1O75955 427 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 TERF2Q15554 542 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 PAXIP1Q6ZW49 1069 aaPredicted RBP20.94■□□□□ 0.94
SPAST-203ENST00000615843 CERS3Q8IU89 383 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 RAB3IL1Q8TBN0 382 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 SPTLC3Q9NUV7 552 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 EXOC5O00471 708 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 PLS1Q14651 629 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 RAB17Q9H0T7 212 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 NUCKS1Q9H1E3 243 aaKnown RBP20.94■□□□□ 0.94
SPAST-203ENST00000615843 HIP1RO75146 1068 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 CUL4AQ13619 759 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 LRCH2Q5VUJ6 765 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 TRIML1Q8N9V2 468 aa20.94■□□□□ 0.94
SPAST-203ENST00000615843 A0A087WUV0 522 aaPredicted RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 RNMTO43148 476 aaKnown RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 CHRNA2Q15822 529 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 ZNF827Q17R98 1081 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 NUP153P49790 1475 aaKnown RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 TCP1P17987 556 aaKnown RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 FBXO38Q6PIJ6 1188 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 ARMT1Q9H993 441 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 IRS4O14654 1257 aaPredicted RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 HNRNPH2P55795 449 aaKnown RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 MGARPQ8TDB4 240 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 CTTNBP2NLQ9P2B4 639 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 SPATA31E1Q6ZUB1 1445 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 RASSF2P50749 326 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 PHLDB2Q86SQ0 1253 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 NAP1L4Q99733 375 aaKnown RBP20.93■□□□□ 0.94
SPAST-203ENST00000615843 EFCC1Q9HA90 598 aa20.93■□□□□ 0.94
SPAST-203ENST00000615843 A0A0D9SFI3 127 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 CCNT1O60563 726 aaKnown RBP20.92■□□□□ 0.94
SPAST-203ENST00000615843 ERCC3P19447 782 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 APBA1Q02410 837 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 TTC19Q6DKK2 380 aaPredicted RBP20.92■□□□□ 0.94
SPAST-203ENST00000615843 C11orf57Q6ZUT1 292 aaPredicted RBP20.92■□□□□ 0.94
SPAST-203ENST00000615843 SSH3Q8TE77 659 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 JRKLQ9Y4A0 524 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 MAP3K19Q56UN5 1328 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 PARP1P09874 1014 aaKnown RBP20.92■□□□□ 0.94
SPAST-203ENST00000615843 TPD52P55327 224 aaPredicted RBP20.92■□□□□ 0.94
SPAST-203ENST00000615843 MORC3Q14149 939 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 XAGE2Q96GT9 111 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 FAM114A2Q9NRY5 505 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 CCDC105Q8IYK2 499 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 TXKP42681 527 aa20.92■□□□□ 0.94
SPAST-203ENST00000615843 CCDC151A5D8V7 595 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 ANKRD42Q8N9B4 389 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 ZCRB1Q8TBF4 217 aaKnown RBP20.91■□□□□ 0.94
SPAST-203ENST00000615843 GBP5Q96PP8 586 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 VEZTQ9HBM0 779 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 NLRC4Q9NPP4 1024 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 KIAA0232Q92628 1395 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 ATP5JP18859 108 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 MUM1Q2TAK8 710 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 AP1ARQ63HQ0 302 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 TRIM68Q6AZZ1 485 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms