RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TYW1Q9NV66 732 aaKnown RBP15.23■□□□□ 0.03
CHD1-212ENST00000614616 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 IQGAP2Q13576 1575 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 RRS1Q15050 365 aaKnown RBP15.23■□□□□ 0.03
CHD1-212ENST00000614616 PEX26Q7Z412 305 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
CHD1-212ENST00000614616 PARD6BQ9BYG5 372 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 TRIM31Q9BZY9 425 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 CABP4P57796 275 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 ANKRD20A4Q4UJ75 823 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 ANKRD20A8PQ5CZ79 823 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 ANKRD20A2Q5SQ80 823 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 ANKRD20A1Q5TYW2 823 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 KIFAP3Q92845 792 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 KLHL29Q96CT2 875 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 PSMB7Q99436 277 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 MAN1A2O60476 641 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 SF3A3Q12874 501 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHD1-212ENST00000614616 WDR78Q5VTH9 848 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 KLC4Q9NSK0 619 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 PABPN1LA6NDY0 278 aaKnown RBP15.22■□□□□ 0.03
CHD1-212ENST00000614616 MAP3K7CLP57077 242 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 SPZ1Q9BXG8 430 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 KAT14Q9H8E8 782 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 DRP2Q13474 957 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
CHD1-212ENST00000614616 CFAP61Q8NHU2 1237 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 ABCF2Q9UG63 623 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 ASIC3Q9UHC3 531 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 MX2P20592 715 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 IGHMBP2P38935 993 aaKnown RBP15.22■□□□□ 0.03
CHD1-212ENST00000614616 PHBP35232 272 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 FGD4Q96M96 766 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 CDC37L1Q7L3B6 337 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 ZC3H18Q86VM9 953 aaKnown RBP15.22■□□□□ 0.03
CHD1-212ENST00000614616 APOEP02649 317 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 C16orf87Q6PH81 154 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 MRPL50Q8N5N7 158 aaKnown RBP15.22■□□□□ 0.03
CHD1-212ENST00000614616 OLFM3Q96PB7 478 aa15.22■□□□□ 0.03
CHD1-212ENST00000614616 NBPF6Q5VWK0 638 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 CEP85Q6P2H3 762 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 NBPF5PQ86XG9 351 aaPredicted RBP15.21■□□□□ 0.03
CHD1-212ENST00000614616 NBPF4Q96M43 638 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 SLC30A9Q6PML9 568 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 TCEANC2Q96MN5 208 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 SPOPO43791 374 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 ATP5HO75947 161 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 NR1D1P20393 614 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 APOBRQ0VD83 1088 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 PPARDQ03181 441 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 SLC5A1P13866 664 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 ARL1P40616 181 aaPredicted RBP15.21■□□□□ 0.03
CHD1-212ENST00000614616 IL9RQ01113 521 aa15.21■□□□□ 0.03
CHD1-212ENST00000614616 NAA16Q6N069 864 aaPredicted RBP15.21■□□□□ 0.03
CHD1-212ENST00000614616 NMIQ13287 307 aaPredicted RBP15.21■□□□□ 0.02
CHD1-212ENST00000614616 DESI2Q9BSY9 194 aa15.21■□□□□ 0.02
CHD1-212ENST00000614616 STXBP3O00186 592 aa15.21■□□□□ 0.02
CHD1-212ENST00000614616 ZBTB22O15209 634 aa15.21■□□□□ 0.02
CHD1-212ENST00000614616 ZSCAN20P17040 1043 aaPredicted RBP15.21■□□□□ 0.02
CHD1-212ENST00000614616 RILPL1Q5EBL4 403 aa15.21■□□□□ 0.02
CHD1-212ENST00000614616 CCDC84Q86UT8 332 aaPredicted RBP15.21■□□□□ 0.02
CHD1-212ENST00000614616 MEIS3Q99687 375 aa15.21■□□□□ 0.02
CHD1-212ENST00000614616 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
CHD1-212ENST00000614616 TDRD7Q8NHU6 1098 aaKnown RBP15.2■□□□□ 0.02
CHD1-212ENST00000614616 AGTPBP1Q9UPW5 1226 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 TMEM232C9JQI7 657 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 PSMD2Q13200 908 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
CHD1-212ENST00000614616 SCYL3Q8IZE3 742 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 RUNDC3BQ96NL0 473 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 IWS1Q96ST2 819 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 FRMD4BQ9Y2L6 1034 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 EPB41P11171 864 aaKnown RBP15.2■□□□□ 0.02
CHD1-212ENST00000614616 CNGA1P29973 690 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 MAP7D3Q8IWC1 876 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 NLRP7Q8WX94 980 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 RGS12O14924 1447 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 KRIT1O00522 736 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 RPL13P26373 211 aaKnown RBP15.2■□□□□ 0.02
CHD1-212ENST00000614616 CAVIN4Q5BKX8 364 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 LRRC8CQ8TDW0 803 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
CHD1-212ENST00000614616 GNPTABQ3T906 1256 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 HAUS8Q9BT25 410 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 CCDC105Q8IYK2 499 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 MAIP1Q8WWC4 291 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 RMDN2Q96LZ7 410 aa15.2■□□□□ 0.02
CHD1-212ENST00000614616 PPP1R12AO14974 1030 aaPredicted RBP15.19■□□□□ 0.02
CHD1-212ENST00000614616 ANKRD42Q8N9B4 389 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 OR8K1Q8NGG5 319 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 NLRP2Q9NX02 1062 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 TATP17735 454 aaPredicted RBP15.19■□□□□ 0.02
CHD1-212ENST00000614616 TRAF1Q13077 416 aa15.19■□□□□ 0.02
CHD1-212ENST00000614616 FAM133BQ5BKY9 247 aaKnown RBP15.19■□□□□ 0.02
CHD1-212ENST00000614616 HAUS4Q9H6D7 363 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms