RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CDC27P30260 824 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 HOXC13P31276 330 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 ARID5AQ03989 594 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 MORC3Q14149 939 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 SYT10Q6XYQ8 523 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 CCDC80Q76M96 950 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 SPATA21Q7Z572 469 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 C11orf74Q86VG3 221 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 SPATS2Q86XZ4 545 aaKnown RBP3.49□□□□□ -1.85
CBWD3-209ENST00000614377 ERMNQ8TAM6 284 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 ADAMTS19Q8TE59 1207 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 KIF1BPQ96EK5 621 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 CCDC34Q96HJ3 373 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 GSDMAQ96QA5 445 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 VPS33BQ9H267 617 aa3.49□□□□□ -1.85
CBWD3-209ENST00000614377 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.49□□□□□ -1.85
CBWD3-209ENST00000614377 XPO7Q9UIA9 1087 aaKnown RBP3.49□□□□□ -1.85
CBWD3-209ENST00000614377 EVC2Q86UK5 1308 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 PHF20L1A8MW92 1017 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 K7ELQ4 463 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SMC2O95347 1197 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 RPL13P26373 211 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 CCNHP51946 323 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TAGLNQ01995 201 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 KIF22Q14807 665 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 CRYMQ14894 314 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 IQCB1Q15051 598 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 PPP2R5BQ15173 497 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 KBTBD12Q3ZCT8 623 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TSHZ3Q63HK5 1081 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 CPLX2Q6PUV4 134 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 PODNQ7Z5L7 613 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SDCCAG8Q86SQ7 713 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TMEM110Q86TL2 294 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 Q8N3U1 123 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ARL10Q8N8L6 244 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 APPL2Q8NEU8 664 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 NEDD1Q8NHV4 660 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 CABLES1Q8TDN4 633 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TRIM11Q96F44 468 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SLC39A3Q9BRY0 314 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 UTP14AQ9BVJ6 771 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 LCMT1Q9UIC8 334 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ATP6V0A2Q9Y487 856 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 EME2A4GXA9 379 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SGTAO43765 313 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 AP1G2O75843 785 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 PROCP04070 461 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 GCFC2P16383 781 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 MAGEA10P43363 369 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 CSE1LP55060 971 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 HDAC4P56524 1084 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 NUCB2P80303 420 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 EXOSC10Q01780 885 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 KIF4BQ2VIQ3 1234 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 GRAMD1BQ3KR37 738 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 RNF20Q5VTR2 975 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ANKRD18AQ8IVF6 992 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TEX9Q8N6V9 391 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TRIML1Q8N9V2 468 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ARMC2Q8NEN0 867 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TRIM52Q96A61 297 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SERINC2Q96SA4 455 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 C1QTNF2Q9BXJ5 285 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ZNF395Q9H8N7 513 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 PICK1Q9NRD5 415 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ENAMQ9NRM1 1142 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 HOMER2Q9NSB8 354 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SPATS2LQ9NUQ6 558 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 PGPEP1Q9NXJ5 209 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 MRPS23Q9Y3D9 190 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 GPR25O00155 361 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SLC26A4O43511 780 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 RTN3O95197 1032 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 RAPGEF3O95398 923 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TPM1P09493 284 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 DNAJA1P31689 397 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 DDIT3P35638 169 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 MRPL12P52815 198 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SRSF11Q05519 484 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 GAS6Q14393 721 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SEPT7Q16181 437 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SMUG1Q53HV7 270 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ARSHQ5FYA8 562 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 LDLRAD1Q5T700 205 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 CLEC17AQ6ZS10 378 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SLC7A5P1Q8MH63 180 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 KRT222Q8N1A0 295 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 LILRB2Q8N423 598 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 SMYD1Q8NB12 490 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 PPHLN1Q8NEY8 458 aaKnown RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 HELQQ8TDG4 1101 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ANKRD24Q8TF21 1146 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TCP11Q8WWU5 503 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 RNF34Q969K3 372 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 ASB16Q96NS5 453 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 BEGAINQ9BUH8 593 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 TRIM6Q9C030 488 aaPredicted RBP3.48□□□□□ -1.85
CBWD3-209ENST00000614377 CSRNP2Q9H175 543 aa3.48□□□□□ -1.85
CBWD3-209ENST00000614377 EXOC1Q9NV70 894 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms