RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	MYC	P01106	439 aa	Predicted RBP	13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	BCR	P11274	1271 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	METTL16	Q86W50	562 aa	Known RBP	13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ANKRD13C	Q8N6S4	541 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ZNF333	Q96JL9	665 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	EHD4	Q9H223	541 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	MCM9	Q9NXL9	1143 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ZBTB21	Q9ULJ3	1066 aa		13.24	□□□□□ -0.29
NPIPB4-222	ENST00000614197	GH2	P01242	217 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	GRK4	P32298	578 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	BACE1	P56817	501 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	FAM110C	Q1W6H9	321 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ABCB5	Q2M3G0	1257 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	CERKL	Q49MI3	558 aa	Predicted RBP	13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SH3D19	Q5HYK7	790 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	TREML2	Q5T2D2	321 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SLAIN1	Q8ND83	568 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SH3TC2	Q8TF17	1288 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	HAUS7	Q99871	368 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ECHDC1	Q9NTX5	307 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	TAOK2	Q9UL54	1235 aa		13.23	□□□□□ -0.29
NPIPB4-222	ENST00000614197	POTEF	A5A3E0	1075 aa		13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	USP14	P54578	494 aa		13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	RAB3GAP1	Q15042	981 aa		13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	USP17L2	Q6R6M4	530 aa		13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	NKX2-3	Q8TAU0	364 aa		13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	RIOK1	Q9BRS2	568 aa	Known RBP	13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	CWC22	Q9HCG8	908 aa	Known RBP	13.22	□□□□□ -0.29
NPIPB4-222	ENST00000614197	DOCK1	Q14185	1865 aa		13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	MPHOSPH10	O00566	681 aa	Known RBP	13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	SMARCA5	O60264	1052 aa	Predicted RBP	13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	MBD4	O95243	580 aa		13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	CAP1	Q01518	475 aa		13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	PRKCZ	Q05513	592 aa		13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	RRP1B	Q14684	758 aa	Known RBP	13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	PRPF38B	Q5VTL8	546 aa	Known RBP	13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	DNAJC18	Q9H819	358 aa		13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ATP8A2	Q9NTI2	1148 aa		13.21	□□□□□ -0.29
NPIPB4-222	ENST00000614197	ADCY3	O60266	1144 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	EN2	P19622	333 aa	Predicted RBP	13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ADD2	P35612	726 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	FLT3LG	P49771	235 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	UBE3C	Q15386	1083 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	TATDN1	Q6P1N9	297 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	EDC3	Q96F86	508 aa	Known RBP	13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	YTHDC1	Q96MU7	727 aa	Known RBP	13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	DCTPP1	Q9H773	170 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ARMT1	Q9H993	441 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SWAP70	Q9UH65	585 aa		13.2	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ERC2	O15083	957 aa		13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	HOXA7	P31268	230 aa	Predicted RBP	13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	RRP1	P56182	461 aa	Known RBP	13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ZYX	Q15942	572 aa	Known RBP	13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	LCORL	Q8N3X6	602 aa		13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	GPRC5A	Q8NFJ5	357 aa		13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SDR42E1	Q8WUS8	393 aa		13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.19	□□□□□ -0.3
NPIPB4-222	ENST00000614197	TCRBV5S4A2T	A0A5A2	114 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L15	C9J2P7	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L13	C9JLJ4	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L11	C9JVI0	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L18	D6R9N7	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L22	D6RA61	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L17	D6RBQ6	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L19	D6RCP7	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L20	D6RJB6	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ZFY	P08048	801 aa	Predicted RBP	13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	CTGF	P29279	349 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	PLCD1	P51178	756 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	HERVK_113	P62684	666 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	CCNA1	P78396	465 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	USP17L24	Q0WX57	530 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	IRF5	Q13568	498 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	RNF208	Q9H0X6	261 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SH2D4A	Q9H788	454 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	GABRQ	Q9UN88	632 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SLC4A4	Q9Y6R1	1079 aa		13.18	□□□□□ -0.3
NPIPB4-222	ENST00000614197	GLRX3	O76003	335 aa	Known RBP	13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	CCL5	P13501	91 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	CAPN2	P17655	700 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	TMEM179	Q6ZVK1	233 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	PXYLP1	Q8TE99	480 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	CCDC17	Q96LX7	622 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	P2RX7	Q99572	595 aa	Known RBP	13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	PAGR1	Q9BTK6	254 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	KIAA1683	Q9H0B3	1180 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	MORF4L1	Q9UBU8	362 aa		13.17	□□□□□ -0.3
NPIPB4-222	ENST00000614197	GJB1	P08034	283 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	MAPK4	P31152	587 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SHMT1	P34896	483 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	JAG1	P78504	1218 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	KBTBD3	Q8NAB2	608 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	SOCS4	Q8WXH5	440 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	GCC1	Q96CN9	775 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	C12orf42	Q96LP6	360 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	ARHGEF10L	Q9HCE6	1279 aa		13.16	□□□□□ -0.3
NPIPB4-222	ENST00000614197	EMILIN3	Q9NT22	766 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms