RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 TTC6Q86TZ1 520 aa27.55■■■□□ 2
FAM228B-208ENST00000613899 RAET1EQ8TD07 263 aa27.55■■■□□ 2
FAM228B-208ENST00000613899 SERPINB13Q9UIV8 391 aa27.55■■■□□ 2
FAM228B-208ENST00000613899 ZBTB21Q9ULJ3 1066 aa27.55■■■□□ 2
FAM228B-208ENST00000613899 MTMR2Q13614 643 aa27.54■■■□□ 2
FAM228B-208ENST00000613899 SH3TC2Q8TF17 1288 aa27.54■■■□□ 2
FAM228B-208ENST00000613899 CRNKL1Q9BZJ0 848 aaKnown RBP27.54■■■□□ 2
FAM228B-208ENST00000613899 ZNF532Q9HCE3 1301 aa27.54■■■□□ 2
FAM228B-208ENST00000613899 PAG1Q9NWQ8 432 aa27.54■■■□□ 2
FAM228B-208ENST00000613899 MYH7P12883 1935 aa27.53■■■□□ 2
FAM228B-208ENST00000613899 BACE1P56817 501 aa27.53■■■□□ 2
FAM228B-208ENST00000613899 FAM110CQ1W6H9 321 aa27.53■■■□□ 2
FAM228B-208ENST00000613899 BOLA2Q9H3K6 86 aa27.53■■■□□ 2
FAM228B-208ENST00000613899 TMOD4Q9NZQ9 345 aa27.53■■■□□ 2
FAM228B-208ENST00000613899 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.52■■■□□ 2
FAM228B-208ENST00000613899 TCRBV5S4A2TA0A5A2 114 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 C19orf81C9J6K1 198 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 USP17L10C9JJH3 530 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 GCLCP48506 637 aaPredicted RBP27.51■■□□□ 1.99
FAM228B-208ENST00000613899 JAG1P78504 1218 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 PRKCZQ05513 592 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 TATDN1Q6P1N9 297 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 ANKRD13CQ8N6S4 541 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 EDC3Q96F86 508 aaKnown RBP27.51■■□□□ 1.99
FAM228B-208ENST00000613899 HAUS7Q99871 368 aa27.51■■□□□ 1.99
FAM228B-208ENST00000613899 BRCA2P51587 3418 aa27.5■■□□□ 1.99
FAM228B-208ENST00000613899 GRK4P32298 578 aa27.5■■□□□ 1.99
FAM228B-208ENST00000613899 ASCC2Q9H1I8 757 aaPredicted RBP27.5■■□□□ 1.99
FAM228B-208ENST00000613899 TNPO2O14787 897 aaKnown RBP27.49■■□□□ 1.99
FAM228B-208ENST00000613899 EN2P19622 333 aaPredicted RBP27.49■■□□□ 1.99
FAM228B-208ENST00000613899 SHROOM1Q2M3G4 852 aaPredicted RBP27.49■■□□□ 1.99
FAM228B-208ENST00000613899 MYCP01106 439 aaPredicted RBP27.48■■□□□ 1.99
FAM228B-208ENST00000613899 GH2P01242 217 aa27.48■■□□□ 1.99
FAM228B-208ENST00000613899 POLR3DP05423 398 aaPredicted RBP27.48■■□□□ 1.99
FAM228B-208ENST00000613899 ADD2P35612 726 aa27.48■■□□□ 1.99
FAM228B-208ENST00000613899 IRX3P78415 501 aaPredicted RBP27.48■■□□□ 1.99
FAM228B-208ENST00000613899 PRPF38BQ5VTL8 546 aaKnown RBP27.48■■□□□ 1.99
FAM228B-208ENST00000613899 SLAIN1Q8ND83 568 aa27.48■■□□□ 1.99
FAM228B-208ENST00000613899 SMARCA5O60264 1052 aaPredicted RBP27.47■■□□□ 1.99
FAM228B-208ENST00000613899 HOXA7P31268 230 aaPredicted RBP27.47■■□□□ 1.99
FAM228B-208ENST00000613899 CERKLQ49MI3 558 aaPredicted RBP27.47■■□□□ 1.99
FAM228B-208ENST00000613899 LCORLQ8N3X6 602 aa27.47■■□□□ 1.99
FAM228B-208ENST00000613899 DCTPP1Q9H773 170 aa27.47■■□□□ 1.99
FAM228B-208ENST00000613899 MCM9Q9NXL9 1143 aa27.47■■□□□ 1.99
FAM228B-208ENST00000613899 PLCD1P51178 756 aa27.46■■□□□ 1.99
FAM228B-208ENST00000613899 COA7Q96BR5 231 aa27.46■■□□□ 1.99
FAM228B-208ENST00000613899 GABRQQ9UN88 632 aa27.46■■□□□ 1.99
FAM228B-208ENST00000613899 UBXN2AP68543 259 aa27.45■■□□□ 1.98
FAM228B-208ENST00000613899 ABCB5Q2M3G0 1257 aa27.45■■□□□ 1.98
FAM228B-208ENST00000613899 SDR42E1Q8WUS8 393 aa27.45■■□□□ 1.98
FAM228B-208ENST00000613899 GPATCH3Q96I76 525 aa27.45■■□□□ 1.98
FAM228B-208ENST00000613899 FEZ1Q99689 392 aa27.45■■□□□ 1.98
FAM228B-208ENST00000613899 CABP5Q9NP86 173 aa27.45■■□□□ 1.98
FAM228B-208ENST00000613899 DCP1AQ9NPI6 582 aaPredicted RBP27.45■■□□□ 1.98
FAM228B-208ENST00000613899 ECHDC1Q9NTX5 307 aa27.45■■□□□ 1.98
FAM228B-208ENST00000613899 SHMT1P34896 483 aa27.44■■□□□ 1.98
FAM228B-208ENST00000613899 FLT3LGP49771 235 aa27.44■■□□□ 1.98
FAM228B-208ENST00000613899 IRF5Q13568 498 aa27.44■■□□□ 1.98
FAM228B-208ENST00000613899 ZSCAN25Q6NSZ9 544 aa27.44■■□□□ 1.98
FAM228B-208ENST00000613899 USP17L2Q6R6M4 530 aa27.44■■□□□ 1.98
FAM228B-208ENST00000613899 ARMT1Q9H993 441 aa27.44■■□□□ 1.98
FAM228B-208ENST00000613899 BIN2Q9UBW5 565 aaPredicted RBP27.44■■□□□ 1.98
FAM228B-208ENST00000613899 MYH8P13535 1937 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 DOCK3Q8IZD9 2030 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 MBD4O95243 580 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 GABPAQ06546 454 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 RAB3GAP1Q15042 981 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 UBE3CQ15386 1083 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 MORF4L1Q9UBU8 362 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 TAOK2Q9UL54 1235 aa27.43■■□□□ 1.98
FAM228B-208ENST00000613899 MKI67P46013 3256 aaKnown RBP27.43■■□□□ 1.98
FAM228B-208ENST00000613899 ADCY3O60266 1144 aa27.42■■□□□ 1.98
FAM228B-208ENST00000613899 USP14P54578 494 aa27.42■■□□□ 1.98
FAM228B-208ENST00000613899 RRP1P56182 461 aaKnown RBP27.42■■□□□ 1.98
FAM228B-208ENST00000613899 MTFR1Q15390 333 aa27.42■■□□□ 1.98
FAM228B-208ENST00000613899 PXYLP1Q8TE99 480 aa27.42■■□□□ 1.98
FAM228B-208ENST00000613899 GTF3C2Q8WUA4 911 aaPredicted RBP27.42■■□□□ 1.98
FAM228B-208ENST00000613899 C12orf42Q96LP6 360 aa27.42■■□□□ 1.98
FAM228B-208ENST00000613899 ATP8A2Q9NTI2 1148 aa27.42■■□□□ 1.98
FAM228B-208ENST00000613899 BAZ2AQ9UIF9 1905 aaKnown RBP27.41■■□□□ 1.98
FAM228B-208ENST00000613899 HERVK_113P62684 666 aa27.41■■□□□ 1.98
FAM228B-208ENST00000613899 NKX2-3Q8TAU0 364 aa27.41■■□□□ 1.98
FAM228B-208ENST00000613899 EMILIN3Q9NT22 766 aa27.41■■□□□ 1.98
FAM228B-208ENST00000613899 DDRGK1Q96HY6 314 aa27.4■■□□□ 1.98
FAM228B-208ENST00000613899 SWAP70Q9UH65 585 aa27.4■■□□□ 1.98
FAM228B-208ENST00000613899 CCL5P13501 91 aa27.39■■□□□ 1.98
FAM228B-208ENST00000613899 SLFNL1Q499Z3 407 aa27.39■■□□□ 1.98
FAM228B-208ENST00000613899 AMOTL1Q8IY63 956 aa27.39■■□□□ 1.98
FAM228B-208ENST00000613899 P2RX7Q99572 595 aaKnown RBP27.39■■□□□ 1.98
FAM228B-208ENST00000613899 KIAA1683Q9H0B3 1180 aa27.39■■□□□ 1.98
FAM228B-208ENST00000613899 ZYXQ15942 572 aaKnown RBP27.38■■□□□ 1.97
FAM228B-208ENST00000613899 RNF208Q9H0X6 261 aa27.38■■□□□ 1.97
FAM228B-208ENST00000613899 PRKAB2O43741 272 aa27.37■■□□□ 1.97
FAM228B-208ENST00000613899 GJB1P08034 283 aa27.37■■□□□ 1.97
FAM228B-208ENST00000613899 ELNP15502 786 aa27.37■■□□□ 1.97
FAM228B-208ENST00000613899 GPRC5AQ8NFJ5 357 aa27.37■■□□□ 1.97
FAM228B-208ENST00000613899 PCDHB15Q9Y5E8 787 aa27.37■■□□□ 1.97
FAM228B-208ENST00000613899 MPHOSPH10O00566 681 aaKnown RBP27.36■■□□□ 1.97
FAM228B-208ENST00000613899 CYP2D6P10635 497 aa27.36■■□□□ 1.97
FAM228B-208ENST00000613899 EVX2Q03828 476 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms