RNA–Protein interactions for RNA: ENST00000612728.4

ZNHIT3-202, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 1 (best)

Gene ZNHIT3, Length 1,981 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-202ENST00000612728 PLCD1P51178 756 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 SLC4A8Q2Y0W8 1093 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 FAM47AQ5JRC9 791 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 DYNLL2Q96FJ2 89 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 ZDHHC15Q96MV8 337 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 VPS33BQ9H267 617 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 FMNL1O95466 1100 aaPredicted RBP15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 CRKP46108 304 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 UBE2HP62256 183 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 SSRP1Q08945 709 aaKnown RBP15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 C16orf86Q6ZW13 317 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 TRIM22Q8IYM9 498 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 NUP133Q8WUM0 1156 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 WASF1Q92558 559 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 PHKBQ93100 1093 aa15.4■□□□□ 0.06
ZNHIT3-202ENST00000612728 BRCA1P38398 1863 aaKnown RBP15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 WDHD1O75717 1129 aaPredicted RBP15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 FOSBP53539 338 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 TFAP4Q01664 338 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 ATL3Q6DD88 541 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 APOBEC3HQ6NTF7 200 aaKnown RBP15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 CAVIN1Q6NZI2 390 aaKnown RBP15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 FAM173BQ6P4H8 233 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 DGKHQ86XP1 1220 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 ALG1Q9BT22 464 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 TCP11L1Q9NUJ3 509 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 USP40Q9NVE5 1235 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 RBM28Q9NW13 759 aaKnown RBP15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 PIM2Q9P1W9 311 aa15.39■□□□□ 0.05
ZNHIT3-202ENST00000612728 GADD45BO75293 160 aaPredicted RBP15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 TSPY3P0CV98 308 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 TSPY8P0CW00 308 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 GUCY1B3Q02153 619 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 TROAPQ12815 778 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 NMT2O60551 498 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 RASA1P20936 1047 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 CDC42EP5Q6NZY7 148 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 ANKS1AQ92625 1134 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
ZNHIT3-202ENST00000612728 MYO3BQ8WXR4 1341 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 CDK8P49336 464 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 PICALMQ13492 652 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 RCSD1Q6JBY9 416 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 NBPF11Q86T75 865 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 CRACR2BQ8N4Y2 399 aaPredicted RBP15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 SLC44A5Q8NCS7 719 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 SPATA32Q96LK8 384 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 MYH6P13533 1939 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 MYH8P13535 1937 aa15.37■□□□□ 0.05
ZNHIT3-202ENST00000612728 YDJCA8MPS7 323 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 DEXIO95424 95 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 TRIM29Q14134 588 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 BRAPQ7Z569 592 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 LARGE2Q8N3Y3 721 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 ZNF396Q96N95 335 aaPredicted RBP15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 RNF26Q9BY78 433 aaPredicted RBP15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 R3HDM1Q15032 1099 aaKnown RBP15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 OTUD7BQ6GQQ9 843 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 CTCFLQ8NI51 663 aaPredicted RBP15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 OSBPL5Q9H0X9 879 aaPredicted RBP15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 KAT14Q9H8E8 782 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 DDX4Q9NQI0 724 aaKnown RBP15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 IL17RBQ9NRM6 502 aa15.36■□□□□ 0.05
ZNHIT3-202ENST00000612728 ZSCAN23Q3MJ62 389 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 LEO1Q8WVC0 666 aaPredicted RBP15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 MAP3K14Q99558 947 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 TFIP11Q9UBB9 837 aaKnown RBP15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 GOLGA6L3A6NEY3 463 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 KIF5BP33176 963 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 RBM5P52756 815 aaKnown RBP eCLIP15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 GABPAQ06546 454 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 KRT40Q6A162 431 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 ILDR1Q86SU0 546 aaPredicted RBP15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 AIFM3Q96NN9 605 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 TMEM63CQ9P1W3 806 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 SWAP70Q9UH65 585 aa15.35■□□□□ 0.05
ZNHIT3-202ENST00000612728 PLIN4Q96Q06 1357 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 FSD2A1L4K1 749 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 ZNF445P59923 1031 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 AKAP17AQ02040 695 aaKnown RBP15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 IDI2Q9BXS1 227 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 GJB4Q9NTQ9 266 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 CD2APQ9Y5K6 639 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 COL4A5P29400 1685 aa15.34■□□□□ 0.05
ZNHIT3-202ENST00000612728 HLA-DOAP06340 250 aa15.33■□□□□ 0.05
ZNHIT3-202ENST00000612728 FUT2Q10981 343 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms