RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 ATAD5Q96QE3 1844 aa17.99■□□□□ 0.47
FDPS-221ENST00000612683 C19orf81C9J6K1 198 aa17.98■□□□□ 0.47
FDPS-221ENST00000612683 MAP3K12Q12852 859 aa17.98■□□□□ 0.47
FDPS-221ENST00000612683 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
FDPS-221ENST00000612683 U2AF1L4Q8WU68 220 aaKnown RBP17.98■□□□□ 0.47
FDPS-221ENST00000612683 IL1RAPL2Q9NP60 686 aa17.98■□□□□ 0.47
FDPS-221ENST00000612683 GINM1Q9NU53 330 aa17.98■□□□□ 0.47
FDPS-221ENST00000612683 USP17L10C9JJH3 530 aa17.97■□□□□ 0.47
FDPS-221ENST00000612683 SGPL1O95470 568 aa17.97■□□□□ 0.47
FDPS-221ENST00000612683 INHAP05111 366 aa17.97■□□□□ 0.47
FDPS-221ENST00000612683 IRX3P78415 501 aaPredicted RBP17.97■□□□□ 0.47
FDPS-221ENST00000612683 SHROOM1Q2M3G4 852 aaPredicted RBP17.97■□□□□ 0.47
FDPS-221ENST00000612683 CERS3Q8IU89 383 aa17.97■□□□□ 0.47
FDPS-221ENST00000612683 RHPN1Q8TCX5 695 aa17.97■□□□□ 0.47
FDPS-221ENST00000612683 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
FDPS-221ENST00000612683 H0YGN5 161 aa17.96■□□□□ 0.47
FDPS-221ENST00000612683 APBB1O00213 710 aa17.96■□□□□ 0.47
FDPS-221ENST00000612683 TFRCP02786 760 aaKnown RBP17.96■□□□□ 0.47
FDPS-221ENST00000612683 P2RX7Q99572 595 aaKnown RBP17.96■□□□□ 0.47
FDPS-221ENST00000612683 ZBTB21Q9ULJ3 1066 aa17.96■□□□□ 0.47
FDPS-221ENST00000612683 MAST2Q6P0Q8 1798 aa17.96■□□□□ 0.47
FDPS-221ENST00000612683 CDK5RAP2Q96SN8 1893 aa17.95■□□□□ 0.46
FDPS-221ENST00000612683 HOXA7P31268 230 aaPredicted RBP17.95■□□□□ 0.46
FDPS-221ENST00000612683 RPAP2Q8IXW5 612 aaPredicted RBP17.95■□□□□ 0.46
FDPS-221ENST00000612683 CLASRPQ8N2M8 674 aaKnown RBP17.95■□□□□ 0.46
FDPS-221ENST00000612683 HTATIP2Q9BUP3 242 aa17.95■□□□□ 0.46
FDPS-221ENST00000612683 COLQQ9Y215 455 aaPredicted RBP17.95■□□□□ 0.46
FDPS-221ENST00000612683 SIPA1L1O43166 1804 aa17.95■□□□□ 0.46
FDPS-221ENST00000612683 GH2P01242 217 aa17.94■□□□□ 0.46
FDPS-221ENST00000612683 TTF1Q15361 905 aaPredicted RBP17.94■□□□□ 0.46
FDPS-221ENST00000612683 TTC6Q86TZ1 520 aa17.94■□□□□ 0.46
FDPS-221ENST00000612683 DEFB118Q96PH6 123 aa17.94■□□□□ 0.46
FDPS-221ENST00000612683 GJD2Q9UKL4 321 aa17.94■□□□□ 0.46
FDPS-221ENST00000612683 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
FDPS-221ENST00000612683 LOC285556D6RIA3 1793 aa17.94■□□□□ 0.46
FDPS-221ENST00000612683 HMMRO75330 724 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 FARP2O94887 1054 aaPredicted RBP17.93■□□□□ 0.46
FDPS-221ENST00000612683 IFIT2P09913 472 aaKnown RBP17.93■□□□□ 0.46
FDPS-221ENST00000612683 HERVK_113P62684 666 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 TMED8Q6PL24 325 aaPredicted RBP17.93■□□□□ 0.46
FDPS-221ENST00000612683 USP17L2Q6R6M4 530 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 UBE2Q1Q7Z7E8 422 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 GPRC5AQ8NFJ5 357 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 MORF4L1Q9UBU8 362 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 SERPINB13Q9UIV8 391 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 MYH1P12882 1939 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 FOCADQ5VW36 1801 aa17.93■□□□□ 0.46
FDPS-221ENST00000612683 MAGEB6P1A0A0J9YX57 407 aa17.92■□□□□ 0.46
FDPS-221ENST00000612683 PEX10O60683 326 aa17.92■□□□□ 0.46
FDPS-221ENST00000612683 CERKLQ49MI3 558 aaPredicted RBP17.92■□□□□ 0.46
FDPS-221ENST00000612683 SLC9C2Q5TAH2 1124 aa17.92■□□□□ 0.46
FDPS-221ENST00000612683 TATDN1Q6P1N9 297 aa17.92■□□□□ 0.46
FDPS-221ENST00000612683 EMILIN3Q9NT22 766 aa17.92■□□□□ 0.46
FDPS-221ENST00000612683 POLR3DP05423 398 aaPredicted RBP17.91■□□□□ 0.46
FDPS-221ENST00000612683 CAPN2P17655 700 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 RAB3GAP1Q15042 981 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 ZYXQ15942 572 aaKnown RBP17.91■□□□□ 0.46
FDPS-221ENST00000612683 CCAR1Q8IX12 1150 aaKnown RBP17.91■□□□□ 0.46
FDPS-221ENST00000612683 DNAJC2Q99543 621 aaKnown RBP17.91■□□□□ 0.46
FDPS-221ENST00000612683 FEZ1Q99689 392 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 EHD4Q9H223 541 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 TXNRD2Q9NNW7 524 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 PAK6Q9NQU5 681 aaPredicted RBP17.91■□□□□ 0.46
FDPS-221ENST00000612683 ZBTB40Q9NUA8 1239 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 RBPJLQ9UBG7 517 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 NR2E3Q9Y5X4 410 aa17.91■□□□□ 0.46
FDPS-221ENST00000612683 GOLIM4O00461 696 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 RAB11FIP3O75154 756 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 HMGCRP04035 888 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 PDE6AP16499 860 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 CYP2B6P20813 491 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 PLCD1P51178 756 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 ABCB5Q2M3G0 1257 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 Q3C1V9 767 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 NUDT12Q9BQG2 462 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
FDPS-221ENST00000612683 PAGR1Q9BTK6 254 aa17.9■□□□□ 0.46
FDPS-221ENST00000612683 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.9■□□□□ 0.462e-6■■■■□ 24.8
FDPS-221ENST00000612683 CHMP4BQ9H444 224 aaKnown RBP17.9■□□□□ 0.46
FDPS-221ENST00000612683 TRIM32Q13049 653 aa17.89■□□□□ 0.45
FDPS-221ENST00000612683 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
FDPS-221ENST00000612683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.89■□□□□ 0.45
FDPS-221ENST00000612683 GTF3C2Q8WUA4 911 aaPredicted RBP17.89■□□□□ 0.45
FDPS-221ENST00000612683 CRNKL1Q9BZJ0 848 aaKnown RBP17.89■□□□□ 0.45
FDPS-221ENST00000612683 HMX1Q9NP08 348 aaPredicted RBP17.89■□□□□ 0.45
FDPS-221ENST00000612683 USP17L15C9J2P7 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 USP17L13C9JLJ4 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 USP17L11C9JVI0 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 USP17L18D6R9N7 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 USP17L22D6RA61 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 USP17L17D6RBQ6 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 USP17L19D6RCP7 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 USP17L20D6RJB6 530 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 MAPK4P31152 587 aa17.88■□□□□ 0.45
FDPS-221ENST00000612683 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.452e-8■■□□□ 13.1
FDPS-221ENST00000612683 USP14P54578 494 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms