RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TDO2P48775 406 aa16.94■□□□□ 0.3
CDH1-213ENST00000612417 MECOMQ03112 1051 aa16.94■□□□□ 0.3
CDH1-213ENST00000612417 PTPAQ15257 358 aa16.94■□□□□ 0.3
CDH1-213ENST00000612417 SPTY2D1Q68D10 685 aaPredicted RBP16.94■□□□□ 0.3
CDH1-213ENST00000612417 TBC1D16Q8TBP0 767 aa16.94■□□□□ 0.3
CDH1-213ENST00000612417 AIFM3Q96NN9 605 aa16.94■□□□□ 0.3
CDH1-213ENST00000612417 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
CDH1-213ENST00000612417 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
CDH1-213ENST00000612417 POLLQ9UGP5 575 aa16.94■□□□□ 0.3
CDH1-213ENST00000612417 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 GSG1L2A8MUP6 293 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 TNNT1P13805 278 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 CCZ1BP86790 482 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 SYCP1Q15431 976 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 C15orf52Q6ZUT6 534 aaKnown RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 MICU3Q86XE3 530 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 ANKRD7Q92527 254 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 MASTLQ96GX5 879 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 MAP3K14Q99558 947 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 SENP2Q9HC62 589 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 PRDX5P30044 214 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 TMEM67Q5HYA8 995 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 C2CD5Q86YS7 1000 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 NSUN4Q96CB9 384 aaKnown RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 MTA3Q9BTC8 594 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 CCDC94Q9BW85 323 aaPredicted RBP16.93■□□□□ 0.3
CDH1-213ENST00000612417 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
CDH1-213ENST00000612417 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 GOLGA8AA7E2F4 631 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 IKBKBO14920 756 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 SKILP12757 684 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
CDH1-213ENST00000612417 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
CDH1-213ENST00000612417 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 PHKBQ93100 1093 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 KRT23Q9C075 422 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 H0YIN7 160 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 RXRAP19793 462 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 NCAPHQ15003 741 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 TPD52L1Q16890 204 aaPredicted RBP16.92■□□□□ 0.3
CDH1-213ENST00000612417 AKNAD1Q5T1N1 836 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 NYAP1Q6ZVC0 841 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 CD209Q9NNX6 404 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
CDH1-213ENST00000612417 LDHBP07195 334 aaKnown RBP16.91■□□□□ 0.3
CDH1-213ENST00000612417 IFNAR1P17181 557 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 MARCKSP29966 332 aaPredicted RBP16.91■□□□□ 0.3
CDH1-213ENST00000612417 SYKP43405 635 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 TPM4P67936 248 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 TRIM29Q14134 588 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 RESP18Q5W5W9 173 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 ZNF384Q8TF68 577 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 STAG1Q8WVM7 1258 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 SLC12A7Q9Y666 1083 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 MYH6P13533 1939 aa16.91■□□□□ 0.3
CDH1-213ENST00000612417 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
CDH1-213ENST00000612417 RIMBP2O15034 1052 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
CDH1-213ENST00000612417 RCAN1P53805 252 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 CTDSPL2Q05D32 466 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 SHC4Q6S5L8 630 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 FILIP1Q7Z7B0 1213 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 WASF1Q92558 559 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDH1-213ENST00000612417 IFIT3O14879 490 aaKnown RBP16.9■□□□□ 0.3
CDH1-213ENST00000612417 CUTAO60888 179 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 GNL2Q13823 731 aaKnown RBP16.9■□□□□ 0.3
CDH1-213ENST00000612417 ELOA2Q8IYF1 753 aaPredicted RBP16.9■□□□□ 0.3
CDH1-213ENST00000612417 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
CDH1-213ENST00000612417 AATFQ9NY61 560 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDH1-213ENST00000612417 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
CDH1-213ENST00000612417 KCNJ6P48051 423 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
CDH1-213ENST00000612417 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
CDH1-213ENST00000612417 MFSD6Q6ZSS7 791 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 CCDC150Q8NCX0 1101 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 FBXW7Q969H0 707 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 XPO4Q9C0E2 1151 aaKnown RBP16.89■□□□□ 0.29
CDH1-213ENST00000612417 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
CDH1-213ENST00000612417 LRRC37AA6NMS7 1700 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 ZBTB22O15209 634 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 STK11IPQ8N1F8 1099 aa16.89■□□□□ 0.29
CDH1-213ENST00000612417 BAZ2AQ9UIF9 1905 aaKnown RBP16.88■□□□□ 0.29
CDH1-213ENST00000612417 MINDY4BA8MYZ0 360 aa16.88■□□□□ 0.29
CDH1-213ENST00000612417 BIN1O00499 593 aa16.88■□□□□ 0.29
CDH1-213ENST00000612417 IL1R1P14778 569 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms