RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 PAWRQ96IZ0 340 aaKnown RBP16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
HMGB1P24-201ENST00000611897 ZBTB7BO15156 539 aaPredicted RBP16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 CYP2B6P20813 491 aa16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 JAG1P78504 1218 aa16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 HNRNPUQ00839 825 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 POLA2Q14181 598 aa16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 CCAR1Q8IX12 1150 aaKnown RBP16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 SSH3Q8TE77 659 aa16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 PAGR1Q9BTK6 254 aa16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 PAK6Q9NQU5 681 aaPredicted RBP16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.2
HMGB1P24-201ENST00000611897 PLXNB2O15031 1838 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 USP5P45974 858 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 BACE1P56817 501 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 SH3D19Q5HYK7 790 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 SZT2Q5T011 3432 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 C7orf61Q8IZ16 206 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 FEZ1Q99689 392 aa16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
HMGB1P24-201ENST00000611897 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 PPP4CP60510 307 aa16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 HERVK_113P62684 666 aa16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 NECAB2Q7Z6G3 386 aa16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 MAGEB6Q8N7X4 407 aa16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 TRIB2Q92519 343 aa16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 P2RX7Q99572 595 aaKnown RBP16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 HMX1Q9NP08 348 aaPredicted RBP16.31■□□□□ 0.2
HMGB1P24-201ENST00000611897 GH2P01242 217 aa16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 RLBP1P12271 317 aa16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 PDE3AQ14432 1141 aa16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 TXNRD2Q9NNW7 524 aa16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 MORF4L1Q9UBU8 362 aa16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 ZMYND8Q9ULU4 1186 aaPredicted RBP16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 EXOC6BQ9Y2D4 811 aa16.3■□□□□ 0.2
HMGB1P24-201ENST00000611897 FOXP4Q8IVH2 680 aaPredicted RBP16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 GPRC5AQ8NFJ5 357 aa16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 EAF2Q96CJ1 260 aaPredicted RBP16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 CRISPLD2Q9H0B8 497 aa16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
HMGB1P24-201ENST00000611897 RPTORQ8N122 1335 aa16.28■□□□□ 0.2
HMGB1P24-201ENST00000611897 C19orf81C9J6K1 198 aa16.28■□□□□ 0.2
HMGB1P24-201ENST00000611897 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
HMGB1P24-201ENST00000611897 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
HMGB1P24-201ENST00000611897 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
HMGB1P24-201ENST00000611897 AACSQ86V21 672 aa16.28■□□□□ 0.2
HMGB1P24-201ENST00000611897 SOCS4Q8WXH5 440 aa16.28■□□□□ 0.2
HMGB1P24-201ENST00000611897 APBB1O00213 710 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 SYN1P17600 705 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 ERVK-24P63145 666 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 USP17L2Q6R6M4 530 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 PORCNQ9H237 461 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
HMGB1P24-201ENST00000611897 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 CEP85Q6P2H3 762 aa16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 ZNF512BQ96KM6 892 aaPredicted RBP16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 IL1RAPL2Q9NP60 686 aa16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 RBPJLQ9UBG7 517 aa16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 NOP58Q9Y2X3 529 aaKnown RBP16.26■□□□□ 0.19
HMGB1P24-201ENST00000611897 MAPK4P31152 587 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 CCL14Q16627 93 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 Q3C1V9 767 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 GPR142Q7Z601 462 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 ANKLE1Q8NAG6 615 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 PANK1Q8TE04 598 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 LRCH3Q96II8 777 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 PRO3102Q9H379 93 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 GINM1Q9NU53 330 aa16.25■□□□□ 0.19
HMGB1P24-201ENST00000611897 LAMA3Q16787 3333 aa16.24■□□□□ 0.19
HMGB1P24-201ENST00000611897 SOX1O00570 391 aaPredicted RBP16.24■□□□□ 0.19
HMGB1P24-201ENST00000611897 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
HMGB1P24-201ENST00000611897 RGS2P41220 211 aa16.24■□□□□ 0.19
HMGB1P24-201ENST00000611897 ABCB5Q2M3G0 1257 aa16.24■□□□□ 0.19
HMGB1P24-201ENST00000611897 PLEKHH3Q7Z736 793 aa16.24■□□□□ 0.19
HMGB1P24-201ENST00000611897 APBA2Q99767 749 aa16.24■□□□□ 0.19
HMGB1P24-201ENST00000611897 MPHOSPH10O00566 681 aaKnown RBP16.23■□□□□ 0.19
HMGB1P24-201ENST00000611897 CAPN2P17655 700 aa16.23■□□□□ 0.19
HMGB1P24-201ENST00000611897 CACNB2Q08289 660 aaPredicted RBP16.23■□□□□ 0.19
HMGB1P24-201ENST00000611897 CERKLQ49MI3 558 aaPredicted RBP16.23■□□□□ 0.19
HMGB1P24-201ENST00000611897 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
HMGB1P24-201ENST00000611897 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms