RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 ZBTB40Q9NUA8 1239 aa26.41■■□□□ 1.82
CBWD3-207ENST00000611426 GABRQQ9UN88 632 aa26.41■■□□□ 1.82
CBWD3-207ENST00000611426 TNPO2O14787 897 aaKnown RBP26.4■■□□□ 1.82
CBWD3-207ENST00000611426 SH3D19Q5HYK7 790 aa26.4■■□□□ 1.82
CBWD3-207ENST00000611426 TMED8Q6PL24 325 aaPredicted RBP26.4■■□□□ 1.82
CBWD3-207ENST00000611426 KIF1BPQ96EK5 621 aa26.4■■□□□ 1.82
CBWD3-207ENST00000611426 WDR18Q9BV38 432 aa26.4■■□□□ 1.82
CBWD3-207ENST00000611426 CHMP4BQ9H444 224 aaKnown RBP26.4■■□□□ 1.82
CBWD3-207ENST00000611426 BCL11AQ9H165 835 aa26.39■■□□□ 1.82
CBWD3-207ENST00000611426 LOC285556D6RIA3 1793 aa26.38■■□□□ 1.81
CBWD3-207ENST00000611426 GDF11O95390 407 aa26.38■■□□□ 1.81
CBWD3-207ENST00000611426 UBXN2AP68543 259 aa26.38■■□□□ 1.81
CBWD3-207ENST00000611426 JAG1P78504 1218 aa26.38■■□□□ 1.81
CBWD3-207ENST00000611426 TTF1Q15361 905 aaPredicted RBP26.38■■□□□ 1.81
CBWD3-207ENST00000611426 SIRT2Q8IXJ6 389 aa26.38■■□□□ 1.81
CBWD3-207ENST00000611426 SLAIN1Q8ND83 568 aa26.38■■□□□ 1.81
CBWD3-207ENST00000611426 GINM1Q9NU53 330 aa26.38■■□□□ 1.81
CBWD3-207ENST00000611426 IFIT2P09913 472 aaKnown RBP26.37■■□□□ 1.81
CBWD3-207ENST00000611426 GCLCP48506 637 aaPredicted RBP26.37■■□□□ 1.81
CBWD3-207ENST00000611426 FLT3LGP49771 235 aa26.37■■□□□ 1.81
CBWD3-207ENST00000611426 BACE1P56817 501 aa26.37■■□□□ 1.81
CBWD3-207ENST00000611426 MTMR2Q13614 643 aa26.37■■□□□ 1.81
CBWD3-207ENST00000611426 FAM110CQ1W6H9 321 aa26.37■■□□□ 1.81
CBWD3-207ENST00000611426 ASCC2Q9H1I8 757 aaPredicted RBP26.37■■□□□ 1.81
CBWD3-207ENST00000611426 TMOD4Q9NZQ9 345 aa26.37■■□□□ 1.81
CBWD3-207ENST00000611426 ADCY3O60266 1144 aa26.36■■□□□ 1.81
CBWD3-207ENST00000611426 CCL5P13501 91 aa26.36■■□□□ 1.81
CBWD3-207ENST00000611426 COA7Q96BR5 231 aa26.36■■□□□ 1.81
CBWD3-207ENST00000611426 MYH1P12882 1939 aa26.36■■□□□ 1.81
CBWD3-207ENST00000611426 RAB11FIP3O75154 756 aa26.35■■□□□ 1.81
CBWD3-207ENST00000611426 SHROOM1Q2M3G4 852 aaPredicted RBP26.35■■□□□ 1.81
CBWD3-207ENST00000611426 NKX2-3Q8TAU0 364 aa26.35■■□□□ 1.81
CBWD3-207ENST00000611426 RNF208Q9H0X6 261 aa26.35■■□□□ 1.81
CBWD3-207ENST00000611426 ZBTB21Q9ULJ3 1066 aa26.35■■□□□ 1.81
CBWD3-207ENST00000611426 C19orf81C9J6K1 198 aa26.34■■□□□ 1.81
CBWD3-207ENST00000611426 USP17L10C9JJH3 530 aa26.34■■□□□ 1.81
CBWD3-207ENST00000611426 IRF5Q13568 498 aa26.33■■□□□ 1.81
CBWD3-207ENST00000611426 SLC9C2Q5TAH2 1124 aa26.33■■□□□ 1.81
CBWD3-207ENST00000611426 TTC6Q86TZ1 520 aa26.33■■□□□ 1.81
CBWD3-207ENST00000611426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.33■■□□□ 1.81
CBWD3-207ENST00000611426 DNAJC2Q99543 621 aaKnown RBP26.33■■□□□ 1.81
CBWD3-207ENST00000611426 SERPINB13Q9UIV8 391 aa26.33■■□□□ 1.81
CBWD3-207ENST00000611426 MAGEB6P1A0A0J9YX57 407 aa26.33■■□□□ 1.8
CBWD3-207ENST00000611426 GJB1P08034 283 aa26.33■■□□□ 1.8
CBWD3-207ENST00000611426 IRX3P78415 501 aaPredicted RBP26.33■■□□□ 1.8
CBWD3-207ENST00000611426 PXYLP1Q8TE99 480 aa26.33■■□□□ 1.8
CBWD3-207ENST00000611426 GCC1Q96CN9 775 aa26.33■■□□□ 1.8
CBWD3-207ENST00000611426 RIOK1Q9BRS2 568 aaKnown RBP26.33■■□□□ 1.8
CBWD3-207ENST00000611426 TAOK2Q9UL54 1235 aa26.33■■□□□ 1.8
CBWD3-207ENST00000611426 GOLIM4O00461 696 aa26.32■■□□□ 1.8
CBWD3-207ENST00000611426 GH2P01242 217 aa26.32■■□□□ 1.8
CBWD3-207ENST00000611426 ELNP15502 786 aa26.32■■□□□ 1.8
CBWD3-207ENST00000611426 PDE6AP16499 860 aa26.32■■□□□ 1.8
CBWD3-207ENST00000611426 HOXA7P31268 230 aaPredicted RBP26.32■■□□□ 1.8
CBWD3-207ENST00000611426 GJA8P48165 433 aa26.32■■□□□ 1.8
CBWD3-207ENST00000611426 TATDN1Q6P1N9 297 aa26.32■■□□□ 1.8
CBWD3-207ENST00000611426 CENPQQ7L2Z9 268 aaPredicted RBP26.32■■□□□ 1.8
CBWD3-207ENST00000611426 EHD4Q9H223 541 aa26.32■■□□□ 1.8
CBWD3-207ENST00000611426 DOCK3Q8IZD9 2030 aa26.31■■□□□ 1.8
CBWD3-207ENST00000611426 SHISA4Q96DD7 197 aa26.31■■□□□ 1.8
CBWD3-207ENST00000611426 P2RX7Q99572 595 aaKnown RBP26.3■■□□□ 1.8
CBWD3-207ENST00000611426 UNC93B1Q9H1C4 597 aa26.3■■□□□ 1.8
CBWD3-207ENST00000611426 ZNF532Q9HCE3 1301 aa26.3■■□□□ 1.8
CBWD3-207ENST00000611426 INHAP05111 366 aa26.29■■□□□ 1.8
CBWD3-207ENST00000611426 CERKLQ49MI3 558 aaPredicted RBP26.29■■□□□ 1.8
CBWD3-207ENST00000611426 CRNKL1Q9BZJ0 848 aaKnown RBP26.29■■□□□ 1.8
CBWD3-207ENST00000611426 MORF4L1Q9UBU8 362 aa26.29■■□□□ 1.8
CBWD3-207ENST00000611426 POLR3DP05423 398 aaPredicted RBP26.28■■□□□ 1.8
CBWD3-207ENST00000611426 PLCD1P51178 756 aa26.28■■□□□ 1.8
CBWD3-207ENST00000611426 USP17L2Q6R6M4 530 aa26.28■■□□□ 1.8
CBWD3-207ENST00000611426 HERVK_113P62684 666 aa26.27■■□□□ 1.8
CBWD3-207ENST00000611426 RAB3GAP1Q15042 981 aa26.27■■□□□ 1.8
CBWD3-207ENST00000611426 U2AF1L4Q8WU68 220 aaKnown RBP26.27■■□□□ 1.8
CBWD3-207ENST00000611426 EDC3Q96F86 508 aaKnown RBP26.27■■□□□ 1.8
CBWD3-207ENST00000611426 BOLA2Q9H3K6 86 aa26.27■■□□□ 1.8
CBWD3-207ENST00000611426 EMILIN3Q9NT22 766 aa26.27■■□□□ 1.8
CBWD3-207ENST00000611426 ABCB5Q2M3G0 1257 aa26.26■■□□□ 1.79
CBWD3-207ENST00000611426 GPRC5AQ8NFJ5 357 aa26.26■■□□□ 1.79
CBWD3-207ENST00000611426 FEZ1Q99689 392 aa26.26■■□□□ 1.79
CBWD3-207ENST00000611426 CABP5Q9NP86 173 aa26.26■■□□□ 1.79
CBWD3-207ENST00000611426 PAG1Q9NWQ8 432 aa26.26■■□□□ 1.79
CBWD3-207ENST00000611426 TCRBV5S4A2TA0A5A2 114 aa26.25■■□□□ 1.79
CBWD3-207ENST00000611426 SGPL1O95470 568 aa26.25■■□□□ 1.79
CBWD3-207ENST00000611426 ATP5JP18859 108 aa26.25■■□□□ 1.79
CBWD3-207ENST00000611426 MCM9Q9NXL9 1143 aa26.25■■□□□ 1.79
CBWD3-207ENST00000611426 SHMT1P34896 483 aa26.24■■□□□ 1.79
CBWD3-207ENST00000611426 ZYXQ15942 572 aaKnown RBP26.24■■□□□ 1.79
CBWD3-207ENST00000611426 GJD2Q9UKL4 321 aa26.24■■□□□ 1.79
CBWD3-207ENST00000611426 PCDHB15Q9Y5E8 787 aa26.24■■□□□ 1.79
CBWD3-207ENST00000611426 PEX10O60683 326 aa26.23■■□□□ 1.79
CBWD3-207ENST00000611426 LCORLQ8N3X6 602 aa26.23■■□□□ 1.79
CBWD3-207ENST00000611426 SDR42E1Q8WUS8 393 aa26.23■■□□□ 1.79
CBWD3-207ENST00000611426 DPF3Q92784 378 aa26.23■■□□□ 1.79
CBWD3-207ENST00000611426 LRRCC1Q9C099 1032 aa26.23■■□□□ 1.79
CBWD3-207ENST00000611426 TXNRD2Q9NNW7 524 aa26.23■■□□□ 1.79
CBWD3-207ENST00000611426 RBPJLQ9UBG7 517 aa26.23■■□□□ 1.79
CBWD3-207ENST00000611426 USP14P54578 494 aa26.22■■□□□ 1.79
CBWD3-207ENST00000611426 GTF3C2Q8WUA4 911 aaPredicted RBP26.22■■□□□ 1.79
CBWD3-207ENST00000611426 DEFB118Q96PH6 123 aa26.22■■□□□ 1.79
CBWD3-207ENST00000611426 HAUS7Q99871 368 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms