RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 USP50Q70EL3 339 aaPredicted RBP26.08■■□□□ 1.77
UBE3C-209ENST00000611269 RALYLQ86SE5 291 aaKnown RBP26.08■■□□□ 1.77
UBE3C-209ENST00000611269 SLC44A5Q8NCS7 719 aa26.08■■□□□ 1.77
UBE3C-209ENST00000611269 NKX2-3Q8TAU0 364 aa26.08■■□□□ 1.77
UBE3C-209ENST00000611269 B4E1Z4 1266 aa26.07■■□□□ 1.76
UBE3C-209ENST00000611269 FGRP09769 529 aa26.07■■□□□ 1.76
UBE3C-209ENST00000611269 PDE4BQ07343 736 aa26.07■■□□□ 1.76
UBE3C-209ENST00000611269 RRP12Q5JTH9 1297 aaKnown RBP26.07■■□□□ 1.76
UBE3C-209ENST00000611269 L1TD1Q5T7N2 865 aaKnown RBP26.07■■□□□ 1.76
UBE3C-209ENST00000611269 CSRNP1Q96S65 589 aa26.07■■□□□ 1.76
UBE3C-209ENST00000611269 PI4KBQ9UBF8 816 aa26.07■■□□□ 1.76
UBE3C-209ENST00000611269 SERPINB13Q9UIV8 391 aa26.07■■□□□ 1.76
UBE3C-209ENST00000611269 ISY1Q9ULR0 285 aaKnown RBP26.07■■□□□ 1.76
UBE3C-209ENST00000611269 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.07■■□□□ 1.76
UBE3C-209ENST00000611269 C16orf86Q6ZW13 317 aa26.06■■□□□ 1.76
UBE3C-209ENST00000611269 APOBEC3FQ8IUX4 373 aaKnown RBP26.06■■□□□ 1.76
UBE3C-209ENST00000611269 CDAN1Q8IWY9 1227 aa26.06■■□□□ 1.76
UBE3C-209ENST00000611269 FBXL16Q8N461 479 aa26.06■■□□□ 1.76
UBE3C-209ENST00000611269 CNNM2Q9H8M5 875 aa26.06■■□□□ 1.76
UBE3C-209ENST00000611269 PCP11498 1178 aaKnown RBP26.06■■□□□ 1.76
UBE3C-209ENST00000611269 KRT23Q9C075 422 aa26.06■■□□□ 1.76
UBE3C-209ENST00000611269 DEFB129Q9H1M3 183 aa26.06■■□□□ 1.76
UBE3C-209ENST00000611269 SLURP2P0DP57 97 aa26.05■■□□□ 1.76
UBE3C-209ENST00000611269 GABPAQ06546 454 aa26.05■■□□□ 1.76
UBE3C-209ENST00000611269 MB21D2Q8IYB1 491 aaPredicted RBP26.05■■□□□ 1.76
UBE3C-209ENST00000611269 EHD4Q9H223 541 aa26.05■■□□□ 1.76
UBE3C-209ENST00000611269 GOLGA6L3A6NEY3 463 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 CDK8P49336 464 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 PGAP2Q9UHJ9 254 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 ATP6V1DQ9Y5K8 247 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 ORC4O43929 436 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 KDM4AO75164 1064 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 PDCP20941 246 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 EAPPQ56P03 285 aaPredicted RBP26.04■■□□□ 1.76
UBE3C-209ENST00000611269 CHST3Q7LGC8 479 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 GTF3C6Q969F1 213 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 CHAMP1Q96JM3 812 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 MKNK2Q9HBH9 465 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 MTMR6Q9Y217 621 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 MYH8P13535 1937 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 PITPNM2Q9BZ72 1349 aa26.04■■□□□ 1.76
UBE3C-209ENST00000611269 F13A1P00488 732 aa26.03■■□□□ 1.76
UBE3C-209ENST00000611269 CRACR2BQ8N4Y2 399 aaPredicted RBP26.03■■□□□ 1.76
UBE3C-209ENST00000611269 BRF1Q92994 677 aa26.03■■□□□ 1.76
UBE3C-209ENST00000611269 RRAGCQ9HB90 399 aa26.03■■□□□ 1.76
UBE3C-209ENST00000611269 FAM196BA6NMK8 535 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 CYB5R4Q7L1T6 521 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 PNMA8AQ86V59 439 aaPredicted RBP26.02■■□□□ 1.76
UBE3C-209ENST00000611269 ZNF526Q8TF50 670 aaPredicted RBP26.02■■□□□ 1.76
UBE3C-209ENST00000611269 TEPSINQ96N21 525 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 DNAJC18Q9H819 358 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 ZNF287Q9HBT7 754 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 RANBP6O60518 1105 aaKnown RBP26.02■■□□□ 1.76
UBE3C-209ENST00000611269 MCM5P33992 734 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 FGD1P98174 961 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 FOXP4Q8IVH2 680 aaPredicted RBP26.02■■□□□ 1.76
UBE3C-209ENST00000611269 ESR2Q92731 530 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 DCPSQ96C86 337 aaKnown RBP26.02■■□□□ 1.76
UBE3C-209ENST00000611269 ZSWIM5Q9P217 1185 aa26.02■■□□□ 1.76
UBE3C-209ENST00000611269 PFKFB2O60825 505 aa26.01■■□□□ 1.75
UBE3C-209ENST00000611269 VEGFAP15692 232 aaPredicted RBP26.01■■□□□ 1.75
UBE3C-209ENST00000611269 ANTXR2P58335 489 aa26.01■■□□□ 1.75
UBE3C-209ENST00000611269 ZC3H15Q8WU90 426 aaKnown RBP26.01■■□□□ 1.75
UBE3C-209ENST00000611269 LRRC2Q9BYS8 371 aa26.01■■□□□ 1.75
UBE3C-209ENST00000611269 SWAP70Q9UH65 585 aa26.01■■□□□ 1.75
UBE3C-209ENST00000611269 RASA1P20936 1047 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 LARP1BQ659C4 914 aaKnown RBP26■■□□□ 1.75
UBE3C-209ENST00000611269 METTL16Q86W50 562 aaKnown RBP26■■□□□ 1.75
UBE3C-209ENST00000611269 LLPHQ9BRT6 129 aaKnown RBP26■■□□□ 1.75
UBE3C-209ENST00000611269 TRIM34Q9BYJ4 488 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 PRC1O43663 620 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 SHMT1P34896 483 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 STK3Q13188 491 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 FAM47AQ5JRC9 791 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 TMEM87AQ8NBN3 555 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 GPT2Q8TD30 523 aa26■■□□□ 1.75
UBE3C-209ENST00000611269 MBD3O95983 291 aa25.99■■□□□ 1.75
UBE3C-209ENST00000611269 EVCP57679 992 aa25.99■■□□□ 1.75
UBE3C-209ENST00000611269 PRAMEF18Q5VWM3 479 aa25.99■■□□□ 1.75
UBE3C-209ENST00000611269 ZNF444Q8N0Y2 327 aaPredicted RBP25.99■■□□□ 1.75
UBE3C-209ENST00000611269 NMRK2Q9NPI5 230 aa25.99■■□□□ 1.75
UBE3C-209ENST00000611269 SULF1Q8IWU6 871 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 CHMP4CQ96CF2 233 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 ZNF274Q96GC6 653 aaPredicted RBP25.98■■□□□ 1.75
UBE3C-209ENST00000611269 HERC5Q9UII4 1024 aaKnown RBP25.98■■□□□ 1.75
UBE3C-209ENST00000611269 WDR19Q8NEZ3 1342 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 TSPY2A6NKD2 308 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 POTEIP0CG38 1075 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 POTEJP0CG39 1038 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 MIGA2Q7L4E1 593 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 PPP2R3BQ9Y5P8 575 aa25.98■■□□□ 1.75
UBE3C-209ENST00000611269 TFAP4Q01664 338 aa25.97■■□□□ 1.75
UBE3C-209ENST00000611269 NBPF12Q5TAG4 269 aaPredicted RBP25.97■■□□□ 1.75
UBE3C-209ENST00000611269 KRT26Q7Z3Y9 468 aa25.97■■□□□ 1.75
UBE3C-209ENST00000611269 ZKSCAN3Q9BRR0 538 aa25.97■■□□□ 1.75
UBE3C-209ENST00000611269 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.97■■□□□ 1.75
UBE3C-209ENST00000611269 TAOK2Q9UL54 1235 aa25.97■■□□□ 1.75
UBE3C-209ENST00000611269 ADM5C9JUS6 153 aa25.96■■□□□ 1.75
UBE3C-209ENST00000611269 SCRN1Q12765 414 aa25.96■■□□□ 1.75
UBE3C-209ENST00000611269 TSPY3P0CV98 308 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms