RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MEI1Q5TIA1 1274 aa7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 TPTE2Q6XPS3 522 aa7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 EMILIN2Q9BXX0 1053 aa7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 IGSF5Q9NSI5 407 aa7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 TTF2Q9UNY4 1162 aaKnown RBP7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 ZNF862O60290 1169 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 HCLS1P14317 486 aaPredicted RBP7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 ZP2Q05996 745 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 ZNF252P-AS1Q0IIN9 211 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 IKZF1Q13422 519 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 TTLL4Q14679 1199 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 KIF4BQ2VIQ3 1234 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 TOP6BLQ8N6T0 577 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 STK35Q8TDR2 534 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 CACNA2D2Q9NY47 1150 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 SAMM50Q9Y512 469 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 USP31Q70CQ4 1352 aa7.03□□□□□ -1.28
SMCHD1-213ENST00000609587 NEFMP07197 916 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 SLFN14P0C7P3 912 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 BMP6P22004 513 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 ZNF76P36508 570 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 ST13P50502 369 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 SCARA3Q6AZY7 606 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 KRTAP5-3Q6L8H2 238 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 SV2BQ7L1I2 683 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 SPACA3Q8IXA5 215 aa7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 HEXIM2Q96MH2 286 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 METTL5Q9NRN9 209 aaKnown RBP7.02□□□□□ -1.29
SMCHD1-213ENST00000609587 FBXO24O75426 580 aa7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 PAGE1O75459 146 aa7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 GLI1P08151 1106 aa7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 INHBBP09529 407 aa7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 FANCCQ00597 558 aa7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 RNF34Q969K3 372 aa7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 ZC3H12CQ9C0D7 883 aaKnown RBP7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 SNX11Q9Y5W9 270 aa7.01□□□□□ -1.29
SMCHD1-213ENST00000609587 HDLBPQ00341 1268 aaKnown RBP7□□□□□ -1.29
SMCHD1-213ENST00000609587 ASB11Q8WXH4 323 aa7□□□□□ -1.29
SMCHD1-213ENST00000609587 KCNB2Q92953 911 aa7□□□□□ -1.29
SMCHD1-213ENST00000609587 CYP8B1Q9UNU6 501 aa7□□□□□ -1.29
SMCHD1-213ENST00000609587 JAG2Q9Y219 1238 aa7□□□□□ -1.29
SMCHD1-213ENST00000609587 RNGTTO60942 597 aaKnown RBP6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 TRIM37O94972 964 aa6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 LRRC14Q15048 493 aa6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 CCDC85BQ15834 202 aaPredicted RBP6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 C9orf131Q5VYM1 1079 aa6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 MAP1SQ66K74 1059 aaPredicted RBP6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 MPZL3Q6UWV2 235 aa6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 FAM214BQ7L5A3 538 aa6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 ISL2Q96A47 359 aa6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 C19orf73Q9NVV2 129 aa6.99□□□□□ -1.29
SMCHD1-213ENST00000609587 NPIPB6E9PJ23 425 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 CELA3AP09093 270 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 AFMP43652 599 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 ZC3H12AQ5D1E8 599 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 LLGL2Q6P1M3 1020 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 HS2ST1Q7LGA3 356 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 AMIGO3Q86WK7 504 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 GRIN3AQ8TCU5 1115 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 KIRREL1Q96J84 757 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 CBX8Q9HC52 389 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 CD320Q9NPF0 282 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 GGT7Q9UJ14 662 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 PCOLCE2Q9UKZ9 415 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 PITPNM2Q9BZ72 1349 aa6.98□□□□□ -1.29
SMCHD1-213ENST00000609587 NFIBO00712 420 aa6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 NKPD1Q17RQ9 610 aa6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 RASIP1Q5U651 963 aa6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 PCNX4Q63HM2 1172 aa6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 GPBAR1Q8TDU6 330 aa6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 NOC4LQ9BVI4 516 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-213ENST00000609587 ERCC5P28715 1186 aaPredicted RBP6.96□□□□□ -1.3
SMCHD1-213ENST00000609587 RPS26P62854 115 aaKnown RBP6.96□□□□□ -1.3
SMCHD1-213ENST00000609587 MPRIPQ6WCQ1 1025 aa6.96□□□□□ -1.3
SMCHD1-213ENST00000609587 FBXO15Q8NCQ5 510 aaPredicted RBP6.96□□□□□ -1.3
SMCHD1-213ENST00000609587 RLBP1P12271 317 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 CTSWP56202 376 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 ERVK-24P63145 666 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 CYFIP1Q7L576 1253 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 ACSBG1Q96GR2 724 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 DIRC2Q96SL1 478 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 NSUN3Q9H649 340 aaKnown RBP6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 KCNK12Q9HB15 430 aa6.95□□□□□ -1.3
SMCHD1-213ENST00000609587 IGF2BP3O00425 579 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 KCNA10Q16322 511 aa6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 MAP3K11Q16584 847 aa6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 TMEM67Q5HYA8 995 aa6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 ERMP1Q7Z2K6 904 aa6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 USP48Q86UV5 1035 aa6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 RSRP1Q9BUV0 290 aa6.94□□□□□ -1.3
SMCHD1-213ENST00000609587 CLCN7P51798 805 aa6.93□□□□□ -1.3
SMCHD1-213ENST00000609587 RING1Q06587 406 aa6.93□□□□□ -1.3
SMCHD1-213ENST00000609587 PWP1Q13610 501 aa6.93□□□□□ -1.3
SMCHD1-213ENST00000609587 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMCHD1-213ENST00000609587 RNF214Q8ND24 703 aa6.93□□□□□ -1.3
SMCHD1-213ENST00000609587 COPRSQ9NQ92 184 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms