RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 FANCLQ9NW38 375 aa7.3□□□□□ -1.24
HDDC2-205ENST00000608456 WWC3Q9ULE0 1092 aa7.3□□□□□ -1.24
HDDC2-205ENST00000608456 RRP15Q9Y3B9 282 aaKnown RBP7.3□□□□□ -1.24
HDDC2-205ENST00000608456 SRPRBQ9Y5M8 271 aaKnown RBP7.3□□□□□ -1.24
HDDC2-205ENST00000608456 MAST3O60307 1309 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 ATXN2Q99700 1313 aaKnown RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 LAMA4Q16363 1823 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 KLF18A0A0U1RQI7 1052 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 SRRM3A6NNA2 597 aaPredicted RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 ZNF213O14771 459 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 IRF6O14896 467 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 TRIM66O15016 1216 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 NPHP1O15259 732 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 POLR3GO15318 223 aaPredicted RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 ATP1A3P13637 1013 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 CKAP4Q07065 602 aaKnown RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 GNL2Q13823 731 aaKnown RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 POSTNQ15063 836 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 UBE3CQ15386 1083 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 AMHR2Q16671 573 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 KIF4BQ2VIQ3 1234 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 DNAJC21Q5F1R6 531 aaKnown RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 EPHA10Q5JZY3 1008 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 ICE2Q659A1 982 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 KRT40Q6A162 431 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 IQCEQ6IPM2 695 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 ATG9AQ7Z3C6 839 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 VPS37DQ86XT2 251 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 ANKRD20A12PQ8NF67 263 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 XAGE3Q8WTP9 111 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 CCDC12Q8WUD4 166 aaPredicted RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 CEP89Q96ST8 783 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 NAPGQ99747 312 aaPredicted RBP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 MYD88Q99836 296 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 ALG1Q9BT22 464 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDDC2-205ENST00000608456 PLA2G12BQ9BX93 195 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 HAUS4Q9H6D7 363 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 CNNM2Q9H8M5 875 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 CEP126Q9P2H0 1117 aa7.29□□□□□ -1.24
HDDC2-205ENST00000608456 LTN1O94822 1766 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 A0A087WZG4 1122 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 GOLGA8BA8MQT2 603 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 GOLIM4O00461 696 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 MAP3K7O43318 606 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 FGAP02671 866 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 ANXA1P04083 346 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 POLR3DP05423 398 aaPredicted RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 IFNAR1P17181 557 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 GUCY2CP25092 1073 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 IARSP41252 1262 aaKnown RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 LMAN1P49257 510 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 METAP2P50579 478 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 ST5P78524 1137 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 FOXO4P98177 505 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 TTC39AQ5SRH9 613 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 NBPF14Q5TI25 921 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 CDKAL1Q5VV42 579 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 CYP26C1Q6V0L0 522 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 DDX46Q7L014 1031 aaKnown RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 UBE3BQ7Z3V4 1068 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 METTL16Q86W50 562 aaKnown RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 FOXP4Q8IVH2 680 aaPredicted RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 IFNL2Q8IZJ0 200 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 C1orf131Q8NDD1 294 aaKnown RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 CCDC148Q8NFR7 591 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 DPF2Q92785 391 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 CCDC102AQ96A19 550 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 FERMT2Q96AC1 680 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 LTV1Q96GA3 475 aaPredicted RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 DCAF5Q96JK2 942 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 WDR24Q96S15 920 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 SEC62Q99442 399 aaKnown RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 FTOQ9C0B1 505 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 SIL1Q9H173 461 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 ANKZF1Q9H8Y5 726 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 NPDC1Q9NQX5 325 aaPredicted RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 ST7Q9NRC1 585 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 AATFQ9NY61 560 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 ADD3Q9UEY8 706 aaKnown RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 RSPH14Q9UHP6 348 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 MAN1B1Q9UKM7 699 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 NFE2L3Q9Y4A8 694 aa7.28□□□□□ -1.24
HDDC2-205ENST00000608456 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.28□□□□□ -1.24
HDDC2-205ENST00000608456 ATRNO75882 1429 aa7.27□□□□□ -1.24
HDDC2-205ENST00000608456 A0A1W2PQC6 194 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 ANO9A1A5B4 782 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 PSMD14O00487 310 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 SH2B2O14492 632 aaPredicted RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 FANCGO15287 622 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 SHOX2O60902 331 aaPredicted RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 FMNL1O95466 1100 aaPredicted RBP7.27□□□□□ -1.25
HDDC2-205ENST00000608456 GCP02774 474 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 MYL1P05976 194 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 NUDT7P0C024 238 aa7.27□□□□□ -1.25
HDDC2-205ENST00000608456 PRLRP16471 622 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms