RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 SPACA3Q8IXA5 215 aa6.72□□□□□ -1.33
RNU4-89P-201ENST00000607443 DIRC2Q96SL1 478 aa6.72□□□□□ -1.33
RNU4-89P-201ENST00000607443 ZC3H12CQ9C0D7 883 aaKnown RBP6.72□□□□□ -1.33
RNU4-89P-201ENST00000607443 POGZQ7Z3K3 1410 aa6.72□□□□□ -1.33
RNU4-89P-201ENST00000607443 ARID4BQ4LE39 1312 aaPredicted RBP6.72□□□□□ -1.33
RNU4-89P-201ENST00000607443 MAGI2Q86UL8 1455 aa6.72□□□□□ -1.33
RNU4-89P-201ENST00000607443 MADDQ8WXG6 1647 aa6.72□□□□□ -1.33
RNU4-89P-201ENST00000607443 LRRIQ1Q96JM4 1722 aa6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 PCF11O94913 1555 aaKnown RBP6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 RAPGEF3O95398 923 aa6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 KIAA0319Q5VV43 1072 aa6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 CIAPIN1Q6FI81 312 aa6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 GJD3Q8N144 294 aa6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 NSUN3Q9H649 340 aaKnown RBP6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 RIMS1Q86UR5 1692 aaKnown RBP6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 ARHGAP5Q13017 1502 aa6.71□□□□□ -1.34
RNU4-89P-201ENST00000607443 FER1L4A9Z1Z3 1794 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 PLCH2O75038 1416 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 FZD6O60353 706 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 MTMR3Q13615 1198 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 ATG14Q6ZNE5 492 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 RELTQ969Z4 430 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 GTF2IRD1Q9UHL9 959 aa6.7□□□□□ -1.34
RNU4-89P-201ENST00000607443 PREX2Q70Z35 1606 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 TROQ12816 1431 aaPredicted RBP6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 PTPRMP28827 1452 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 ZNF518AQ6AHZ1 1483 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 FYCO1Q9BQS8 1478 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 NEFMP07197 916 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 ISL2Q96A47 359 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 KCNK12Q9HB15 430 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 SSU72Q9NP77 194 aaKnown RBP6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 C19orf73Q9NVV2 129 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 PITPNM2Q9BZ72 1349 aa6.69□□□□□ -1.34
RNU4-89P-201ENST00000607443 CASKIN1Q8WXD9 1431 aa6.68□□□□□ -1.34
RNU4-89P-201ENST00000607443 SCAPERQ9BY12 1400 aa6.68□□□□□ -1.34
RNU4-89P-201ENST00000607443 FAM13AO94988 1023 aa6.68□□□□□ -1.34
RNU4-89P-201ENST00000607443 GDNFP39905 211 aa6.68□□□□□ -1.34
RNU4-89P-201ENST00000607443 EFCAB2Q5VUJ9 269 aa6.68□□□□□ -1.34
RNU4-89P-201ENST00000607443 C9orf84Q5VXU9 1444 aa6.67□□□□□ -1.34
RNU4-89P-201ENST00000607443 CDC42BPBQ9Y5S2 1711 aa6.67□□□□□ -1.34
RNU4-89P-201ENST00000607443 EHD4Q9H223 541 aa6.67□□□□□ -1.34
RNU4-89P-201ENST00000607443 CCDC87Q9NVE4 849 aa6.67□□□□□ -1.34
RNU4-89P-201ENST00000607443 SMG5Q9UPR3 1016 aaKnown RBP6.67□□□□□ -1.34
RNU4-89P-201ENST00000607443 ITSN2Q9NZM3 1697 aa6.67□□□□□ -1.34
RNU4-89P-201ENST00000607443 CDC42BPAQ5VT25 1732 aa6.67□□□□□ -1.34
RNU4-89P-201ENST00000607443 KDM5CP41229 1560 aa6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 TCAF2A6NFQ2 919 aa6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 GSTP1P09211 210 aaKnown RBP6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 GLDCP23378 1020 aa6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 ZNF157P51786 506 aaPredicted RBP6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 CLCN7P51798 805 aa6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 HNRNPUQ00839 825 aaKnown RBP eCLIP6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 RPS26P11Q5JNZ5 115 aaPredicted RBP6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 CARS2Q9HA77 564 aaKnown RBP6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 DCP1AQ9NPI6 582 aaPredicted RBP6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 ATP10AO60312 1499 aa6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 ABCC1P33527 1531 aa6.66□□□□□ -1.34
RNU4-89P-201ENST00000607443 ETV2O00321 342 aaPredicted RBP6.65□□□□□ -1.34
RNU4-89P-201ENST00000607443 NUAK1O60285 661 aa6.65□□□□□ -1.34
RNU4-89P-201ENST00000607443 USPL1Q5W0Q7 1092 aa6.65□□□□□ -1.34
RNU4-89P-201ENST00000607443 RNF214Q8ND24 703 aa6.65□□□□□ -1.34
RNU4-89P-201ENST00000607443 CSRNP1Q96S65 589 aa6.65□□□□□ -1.34
RNU4-89P-201ENST00000607443 PRDM10Q9NQV6 1147 aa6.65□□□□□ -1.34
RNU4-89P-201ENST00000607443 YEATS2Q9ULM3 1422 aa6.65□□□□□ -1.35
RNU4-89P-201ENST00000607443 REREQ9P2R6 1566 aa6.65□□□□□ -1.35
RNU4-89P-201ENST00000607443 PREX1Q8TCU6 1659 aa6.65□□□□□ -1.35
RNU4-89P-201ENST00000607443 FAAP100Q0VG06 881 aa6.64□□□□□ -1.35
RNU4-89P-201ENST00000607443 DBX2Q6ZNG2 339 aa6.64□□□□□ -1.35
RNU4-89P-201ENST00000607443 KCNN1Q92952 543 aa6.64□□□□□ -1.35
RNU4-89P-201ENST00000607443 EPB41L4BQ9H329 900 aa6.64□□□□□ -1.35
RNU4-89P-201ENST00000607443 PARD6AQ9NPB6 346 aa6.64□□□□□ -1.35
RNU4-89P-201ENST00000607443 DIP2CQ9Y2E4 1556 aa6.64□□□□□ -1.35
RNU4-89P-201ENST00000607443 SIGLEC1Q9BZZ2 1709 aa6.64□□□□□ -1.35
RNU4-89P-201ENST00000607443 LINC00310P59036 64 aa6.63□□□□□ -1.35
RNU4-89P-201ENST00000607443 ERVK-24P63145 666 aa6.63□□□□□ -1.35
RNU4-89P-201ENST00000607443 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
RNU4-89P-201ENST00000607443 ABCA6Q8N139 1617 aa6.63□□□□□ -1.35
RNU4-89P-201ENST00000607443 ABCB6Q9NP58 842 aa6.63□□□□□ -1.35
RNU4-89P-201ENST00000607443 EHBP1L1Q8N3D4 1523 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 ARHGEF12Q9NZN5 1544 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 LMTK3Q96Q04 1460 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 MLH3Q9UHC1 1453 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 GNAT3A8MTJ3 354 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 FOXD2O60548 495 aaPredicted RBP6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 PDZD3Q86UT5 571 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 NPAS4Q8IUM7 802 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 KCNB2Q92953 911 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 IRF2BPLQ9H1B7 796 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 SEMA3GQ9NS98 782 aa6.62□□□□□ -1.35
RNU4-89P-201ENST00000607443 PLEKHH2Q8IVE3 1493 aa6.61□□□□□ -1.35
RNU4-89P-201ENST00000607443 MTUS2Q5JR59 1369 aa6.61□□□□□ -1.35
RNU4-89P-201ENST00000607443 EOMESO95936 686 aa6.61□□□□□ -1.35
RNU4-89P-201ENST00000607443 MLECQ14165 292 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms