RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 R3HDMLQ9H3Y0 253 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 ZNF532Q9HCE3 1301 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.47
CTSA-215ENST00000607187 BAZ2AQ9UIF9 1905 aaKnown RBP12.08□□□□□ -0.48
CTSA-215ENST00000607187 MAGEB6P1A0A0J9YX57 407 aa12.08□□□□□ -0.48
CTSA-215ENST00000607187 GPR25O00155 361 aa12.08□□□□□ -0.48
CTSA-215ENST00000607187 CETPP11597 493 aa12.08□□□□□ -0.48
CTSA-215ENST00000607187 SNAPC2Q13487 334 aa12.08□□□□□ -0.48
CTSA-215ENST00000607187 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
CTSA-215ENST00000607187 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
CTSA-215ENST00000607187 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
CTSA-215ENST00000607187 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTSA-215ENST00000607187 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTSA-215ENST00000607187 HERC5Q9UII4 1024 aaKnown RBP12.08□□□□□ -0.48
CTSA-215ENST00000607187 KCNH4Q9UQ05 1017 aa12.08□□□□□ -0.48
CTSA-215ENST00000607187 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
CTSA-215ENST00000607187 FAM196BA6NMK8 535 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 PTPRAP18433 802 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 USP5P45974 858 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 CRHR2Q13324 411 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 FOXP4Q8IVH2 680 aaPredicted RBP12.07□□□□□ -0.48
CTSA-215ENST00000607187 FAM43AQ8N2R8 423 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 GCC1Q96CN9 775 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 ZCCHC17Q9NP64 241 aaKnown RBP12.07□□□□□ -0.48
CTSA-215ENST00000607187 PICK1Q9NRD5 415 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
CTSA-215ENST00000607187 CXCL11O14625 94 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 ADD2P35612 726 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 RRP1BQ14684 758 aaKnown RBP12.06□□□□□ -0.48
CTSA-215ENST00000607187 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 EXOC6Q8TAG9 804 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 SAP30BPQ9UHR5 308 aaKnown RBP12.06□□□□□ -0.48
CTSA-215ENST00000607187 AFG3L2Q9Y4W6 797 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 ZHX2Q9Y6X8 837 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
CTSA-215ENST00000607187 MYH8P13535 1937 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 BTBD19C9JJ37 291 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 FKTNO75072 461 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 CAP2P40123 477 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 DGKZQ13574 1117 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 MOGSQ13724 837 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 UBE3CQ15386 1083 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 ANKRD45Q5TZF3 282 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 CTU1Q7Z7A3 348 aaKnown RBP12.05□□□□□ -0.48
CTSA-215ENST00000607187 OTUD7AQ8TE49 926 aaPredicted RBP12.05□□□□□ -0.48
CTSA-215ENST00000607187 CRNKL1Q9BZJ0 848 aaKnown RBP12.05□□□□□ -0.48
CTSA-215ENST00000607187 MCOLN1Q9GZU1 580 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 DNAJC18Q9H819 358 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
CTSA-215ENST00000607187 SALL3Q9BXA9 1300 aa12.05□□□□□ -0.48
CTSA-215ENST00000607187 A0A0G2JLL6 359 aaPredicted RBP12.04□□□□□ -0.48
CTSA-215ENST00000607187 ERC2O15083 957 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 CHGBP05060 677 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 HLA-DOAP06340 250 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 TAF1CQ15572 869 aaPredicted RBP12.04□□□□□ -0.48
CTSA-215ENST00000607187 SLC4A8Q2Y0W8 1093 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 ZSCAN25Q6NSZ9 544 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 PRRT2Q7Z6L0 340 aaPredicted RBP12.04□□□□□ -0.48
CTSA-215ENST00000607187 ANKRD23Q86SG2 305 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
CTSA-215ENST00000607187 KBTBD3Q8NAB2 608 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 ABHD8Q96I13 439 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 EHD4Q9H223 541 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 ZFYVE28Q9HCC9 887 aa12.04□□□□□ -0.48
CTSA-215ENST00000607187 LOC285556D6RIA3 1793 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
CTSA-215ENST00000607187 MBD4O95243 580 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 MX1P20591 662 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 DSG2Q14126 1118 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 TTC6Q86TZ1 520 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
CTSA-215ENST00000607187 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 SDR42E1Q8WUS8 393 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 TRIM34Q9BYJ4 488 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
CTSA-215ENST00000607187 ARMT1Q9H993 441 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 DCP1AQ9NPI6 582 aaPredicted RBP12.03□□□□□ -0.48
CTSA-215ENST00000607187 SERPINB13Q9UIV8 391 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 BRCA2P51587 3418 aa12.03□□□□□ -0.48
CTSA-215ENST00000607187 USP17L5A8MUK1 530 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 PDHXO00330 501 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 TLR2O60603 784 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 IGHDP01880 384 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 ASNSP08243 561 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 PLCD1P51178 756 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.49
CTSA-215ENST00000607187 GPAT2Q6NUI2 795 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 TATDN1Q6P1N9 297 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 FASTKD5Q7L8L6 764 aaKnown RBP12.02□□□□□ -0.49
CTSA-215ENST00000607187 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 PUS7LQ9H0K6 701 aaKnown RBP12.02□□□□□ -0.49
CTSA-215ENST00000607187 ATP8A2Q9NTI2 1148 aa12.02□□□□□ -0.49
CTSA-215ENST00000607187 GINM1Q9NU53 330 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms