RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 STAP2Q9UGK3 403 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 SAP30BPQ9UHR5 308 aaKnown RBP25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 PALD1Q9ULE6 856 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 MYH1P12882 1939 aa25.58■■□□□ 1.69
VIM-AS1-202ENST00000605833 SOX1O00570 391 aaPredicted RBP25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 ASNSP08243 561 aa25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 PLCG2P16885 1265 aa25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 POLA2Q14181 598 aa25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 C7orf61Q8IZ16 206 aa25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 P2RX7Q99572 595 aaKnown RBP25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 TRIM34Q9BYJ4 488 aa25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 TXNRD2Q9NNW7 524 aa25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 PIH1D3Q9NQM4 214 aaKnown RBP25.57■■□□□ 1.68
VIM-AS1-202ENST00000605833 CYP2B6P20813 491 aa25.56■■□□□ 1.68
VIM-AS1-202ENST00000605833 CCDC158Q5M9N0 1113 aa25.56■■□□□ 1.68
VIM-AS1-202ENST00000605833 HMX1Q9NP08 348 aaPredicted RBP25.56■■□□□ 1.68
VIM-AS1-202ENST00000605833 GPR108Q9NPR9 543 aa25.56■■□□□ 1.68
VIM-AS1-202ENST00000605833 RPTORQ8N122 1335 aa25.56■■□□□ 1.68
VIM-AS1-202ENST00000605833 CAPN2P17655 700 aa25.55■■□□□ 1.68
VIM-AS1-202ENST00000605833 ZAP70P43403 619 aa25.55■■□□□ 1.68
VIM-AS1-202ENST00000605833 PPP4CP60510 307 aa25.55■■□□□ 1.68
VIM-AS1-202ENST00000605833 HERVK_113P62684 666 aa25.55■■□□□ 1.68
VIM-AS1-202ENST00000605833 DYNLL1P63167 89 aaKnown RBP25.55■■□□□ 1.68
VIM-AS1-202ENST00000605833 TLR7Q9NYK1 1049 aaKnown RBP25.55■■□□□ 1.68
VIM-AS1-202ENST00000605833 ZBTB21Q9ULJ3 1066 aa25.55■■□□□ 1.68
VIM-AS1-202ENST00000605833 LRCH3Q96II8 777 aa25.54■■□□□ 1.68
VIM-AS1-202ENST00000605833 ZMYND8Q9ULU4 1186 aaPredicted RBP25.54■■□□□ 1.68
VIM-AS1-202ENST00000605833 SURF6O75683 361 aaKnown RBP25.53■■□□□ 1.68
VIM-AS1-202ENST00000605833 HOXA7P31268 230 aaPredicted RBP25.53■■□□□ 1.68
VIM-AS1-202ENST00000605833 MNX1P50219 401 aaPredicted RBP25.53■■□□□ 1.68
VIM-AS1-202ENST00000605833 METTL16Q86W50 562 aaKnown RBP25.53■■□□□ 1.68
VIM-AS1-202ENST00000605833 ANKLE1Q8NAG6 615 aa25.53■■□□□ 1.68
VIM-AS1-202ENST00000605833 SSH3Q8TE77 659 aa25.53■■□□□ 1.68
VIM-AS1-202ENST00000605833 A0A1W2PPC1 479 aa25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 USP17L10C9JJH3 530 aa25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 PRKAR2AP13861 404 aaKnown RBP25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 HNRNPUQ00839 825 aaKnown RBP eCLIP25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 ZKSCAN2Q63HK3 967 aa25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 GPRC5AQ8NFJ5 357 aa25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 PAGR1Q9BTK6 254 aa25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 NBPF3Q9H094 633 aa25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 DBNLQ9UJU6 430 aaKnown RBP25.52■■□□□ 1.68
VIM-AS1-202ENST00000605833 ATP8B2P98198 1209 aa25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 FOXP4Q8IVH2 680 aaPredicted RBP25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 MIGA1Q8NAN2 632 aa25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 NUDT12Q9BQG2 462 aa25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 CCDC8Q9H0W5 538 aaPredicted RBP25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 PORCNQ9H237 461 aa25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 RBPJLQ9UBG7 517 aa25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 NDUFB9Q9Y6M9 179 aa25.51■■□□□ 1.67
VIM-AS1-202ENST00000605833 C19orf81C9J6K1 198 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 HLA-DOAP06340 250 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 COL6A3P12111 3177 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 SYN1P17600 705 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 CYP7A1P22680 504 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 FRMPD3Q5JV73 1810 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 MAP3K21Q5TCX8 1036 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 SOCS4Q8WXH5 440 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 C11orf49Q9H6J7 331 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 EMILIN3Q9NT22 766 aa25.5■■□□□ 1.67
VIM-AS1-202ENST00000605833 IDH1O75874 414 aaKnown RBP25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 GH2P01242 217 aa25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 ERVK-9P63128 1117 aa25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 ERVK-24P63145 666 aa25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 ZYXQ15942 572 aaKnown RBP25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 Q3C1V9 767 aa25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 POTEEQ6S8J3 1075 aa25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 ZNF512BQ96KM6 892 aaPredicted RBP25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 OGDHLQ9ULD0 1010 aa25.49■■□□□ 1.67
VIM-AS1-202ENST00000605833 ZKSCAN1P17029 563 aaPredicted RBP25.48■■□□□ 1.67
VIM-AS1-202ENST00000605833 PDE3AQ14432 1141 aa25.48■■□□□ 1.67
VIM-AS1-202ENST00000605833 CCL14Q16627 93 aa25.48■■□□□ 1.67
VIM-AS1-202ENST00000605833 GDF15Q99988 308 aa25.48■■□□□ 1.67
VIM-AS1-202ENST00000605833 NAV1Q8NEY1 1877 aa25.47■■□□□ 1.67
VIM-AS1-202ENST00000605833 MAPK4P31152 587 aa25.47■■□□□ 1.67
VIM-AS1-202ENST00000605833 GPR142Q7Z601 462 aa25.47■■□□□ 1.67
VIM-AS1-202ENST00000605833 EAF2Q96CJ1 260 aaPredicted RBP25.47■■□□□ 1.67
VIM-AS1-202ENST00000605833 GINM1Q9NU53 330 aa25.47■■□□□ 1.67
VIM-AS1-202ENST00000605833 PFASO15067 1338 aa25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 USP5P45974 858 aa25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 CACNB2Q08289 660 aaPredicted RBP25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 USP17L2Q6R6M4 530 aa25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 ITPRIPQ8IWB1 547 aa25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 CCAR1Q8IX12 1150 aaKnown RBP25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 MAGEB6Q8N7X4 407 aa25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 FEZ1Q99689 392 aa25.46■■□□□ 1.67
VIM-AS1-202ENST00000605833 XRCC5P13010 732 aaKnown RBP25.45■■□□□ 1.66
VIM-AS1-202ENST00000605833 CCND3P30281 292 aaPredicted RBP25.45■■□□□ 1.66
VIM-AS1-202ENST00000605833 FTSJ3Q8IY81 847 aaKnown RBP25.45■■□□□ 1.66
VIM-AS1-202ENST00000605833 USP6NLQ92738 828 aa25.45■■□□□ 1.66
VIM-AS1-202ENST00000605833 NOP58Q9Y2X3 529 aaKnown RBP25.45■■□□□ 1.66
VIM-AS1-202ENST00000605833 RLBP1P12271 317 aa25.44■■□□□ 1.66
VIM-AS1-202ENST00000605833 RGS2P41220 211 aa25.44■■□□□ 1.66
VIM-AS1-202ENST00000605833 MORN1Q5T089 497 aa25.44■■□□□ 1.66
VIM-AS1-202ENST00000605833 PLEKHH3Q7Z736 793 aa25.44■■□□□ 1.66
VIM-AS1-202ENST00000605833 APBA2Q99767 749 aa25.44■■□□□ 1.66
VIM-AS1-202ENST00000605833 ANTXR1Q9H6X2 564 aa25.44■■□□□ 1.66
VIM-AS1-202ENST00000605833 CWC22Q9HCG8 908 aaKnown RBP25.44■■□□□ 1.66
VIM-AS1-202ENST00000605833 CNMDO75829 334 aa25.43■■□□□ 1.66
VIM-AS1-202ENST00000605833 MAGEA10P43363 369 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms