RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 IGHDP01880 384 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 SLURP2P0DP57 97 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 GIMAP6Q6P9H5 292 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 EVI5LQ96CN4 794 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 ERO1AQ96HE7 468 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 PARK7Q99497 189 aaKnown RBP23.09■■□□□ 1.29
SRSF4-206ENST00000605204 FSD1Q9BTV5 496 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 WDR18Q9BV38 432 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 LNPKQ9C0E8 428 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 SWAP70Q9UH65 585 aa23.09■■□□□ 1.29
SRSF4-206ENST00000605204 TRIM75PA6NK02 468 aa23.08■■□□□ 1.29
SRSF4-206ENST00000605204 TLR2O60603 784 aa23.08■■□□□ 1.29
SRSF4-206ENST00000605204 MOGSQ13724 837 aa23.08■■□□□ 1.29
SRSF4-206ENST00000605204 ARHGEF6Q15052 776 aa23.08■■□□□ 1.29
SRSF4-206ENST00000605204 PROCA1Q8NCQ7 364 aaPredicted RBP23.08■■□□□ 1.29
SRSF4-206ENST00000605204 CD99L2Q8TCZ2 262 aa23.08■■□□□ 1.29
SRSF4-206ENST00000605204 PUS7LQ9H0K6 701 aaKnown RBP23.08■■□□□ 1.29
SRSF4-206ENST00000605204 ZBTB21Q9ULJ3 1066 aa23.08■■□□□ 1.29
SRSF4-206ENST00000605204 SLC4A4Q9Y6R1 1079 aa23.08■■□□□ 1.29
SRSF4-206ENST00000605204 SIPA1L1O43166 1804 aa23.08■■□□□ 1.28
SRSF4-206ENST00000605204 PDHXO00330 501 aa23.07■■□□□ 1.28
SRSF4-206ENST00000605204 GABPAQ06546 454 aa23.07■■□□□ 1.28
SRSF4-206ENST00000605204 ARPP21Q9UBL0 812 aaPredicted RBP23.07■■□□□ 1.28
SRSF4-206ENST00000605204 PLCD1P51178 756 aa23.06■■□□□ 1.28
SRSF4-206ENST00000605204 SP3Q02447 781 aa23.06■■□□□ 1.28
SRSF4-206ENST00000605204 STRBPQ96SI9 672 aaKnown RBP23.06■■□□□ 1.28
SRSF4-206ENST00000605204 NAV1Q8NEY1 1877 aa23.06■■□□□ 1.28
SRSF4-206ENST00000605204 MYH7P12883 1935 aa23.06■■□□□ 1.28
SRSF4-206ENST00000605204 POTEFA5A3E0 1075 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 SPP2Q13103 211 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 PABPC4Q13310 644 aaKnown RBP eCLIP23.05■■□□□ 1.28
SRSF4-206ENST00000605204 RRP1BQ14684 758 aaKnown RBP23.05■■□□□ 1.28
SRSF4-206ENST00000605204 SLC4A8Q2Y0W8 1093 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 SLFNL1Q499Z3 407 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 CERKLQ49MI3 558 aaPredicted RBP23.05■■□□□ 1.28
SRSF4-206ENST00000605204 B4GALNT3Q6L9W6 998 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 OSBP2Q969R2 916 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 OSBPL3Q9H4L5 887 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 PNMA3Q9UL41 463 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 AGTPBP1Q9UPW5 1226 aa23.05■■□□□ 1.28
SRSF4-206ENST00000605204 KIAA0100Q14667 2235 aaKnown RBP23.05■■□□□ 1.28
SRSF4-206ENST00000605204 C19orf81C9J6K1 198 aa23.04■■□□□ 1.28
SRSF4-206ENST00000605204 PRKAB2O43741 272 aa23.04■■□□□ 1.28
SRSF4-206ENST00000605204 SH3D19Q5HYK7 790 aa23.04■■□□□ 1.28
SRSF4-206ENST00000605204 CABP5Q9NP86 173 aa23.04■■□□□ 1.28
SRSF4-206ENST00000605204 MYH1P12882 1939 aa23.04■■□□□ 1.28
SRSF4-206ENST00000605204 GPAA1O43292 621 aa23.03■■□□□ 1.28
SRSF4-206ENST00000605204 GDF11O95390 407 aa23.03■■□□□ 1.28
SRSF4-206ENST00000605204 CHGBP05060 677 aa23.03■■□□□ 1.28
SRSF4-206ENST00000605204 SHMT1P34896 483 aa23.03■■□□□ 1.28
SRSF4-206ENST00000605204 ABCB5Q2M3G0 1257 aa23.03■■□□□ 1.28
SRSF4-206ENST00000605204 GPAT2Q6NUI2 795 aa23.03■■□□□ 1.28
SRSF4-206ENST00000605204 GADL1Q6ZQY3 521 aa23.03■■□□□ 1.28
SRSF4-206ENST00000605204 GH2P01242 217 aa23.02■■□□□ 1.28
SRSF4-206ENST00000605204 BACE1P56817 501 aa23.02■■□□□ 1.28
SRSF4-206ENST00000605204 ZMYM1Q5SVZ6 1142 aa23.02■■□□□ 1.28
SRSF4-206ENST00000605204 C12orf60Q5U649 245 aa23.02■■□□□ 1.28
SRSF4-206ENST00000605204 NACAP1Q9BZK3 213 aa23.02■■□□□ 1.28
SRSF4-206ENST00000605204 USP17L10C9JJH3 530 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 USP17L12C9JPN9 530 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 USP17L21D6R901 530 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
SRSF4-206ENST00000605204 SBK1Q52WX2 424 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 CCDC84Q86UT8 332 aaPredicted RBP23.01■■□□□ 1.27
SRSF4-206ENST00000605204 CCDC17Q96LX7 622 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 TMOD4Q9NZQ9 345 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.01■■□□□ 1.27
SRSF4-206ENST00000605204 KIF22Q14807 665 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 PTPN22Q9Y2R2 807 aa23.01■■□□□ 1.27
SRSF4-206ENST00000605204 ADGRA2Q96PE1 1338 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 GSG1L2A8MUP6 293 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 GNRH1P01148 92 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 HMGCS2P54868 508 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 MTMR2Q13614 643 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 C17orf99Q6UX52 265 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 TMEM179Q6ZVK1 233 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 C16orf86Q6ZW13 317 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 PLEKHM2Q8IWE5 1019 aa23■■□□□ 1.27
SRSF4-206ENST00000605204 PHIPQ8WWQ0 1821 aa22.99■■□□□ 1.27
SRSF4-206ENST00000605204 USP14P54578 494 aa22.99■■□□□ 1.27
SRSF4-206ENST00000605204 JAG1P78504 1218 aa22.99■■□□□ 1.27
SRSF4-206ENST00000605204 CTR9Q6PD62 1173 aa22.99■■□□□ 1.27
SRSF4-206ENST00000605204 SMCR8Q8TEV9 937 aaPredicted RBP22.99■■□□□ 1.27
SRSF4-206ENST00000605204 ZNF287Q9HBT7 754 aa22.99■■□□□ 1.27
SRSF4-206ENST00000605204 ATAD5Q96QE3 1844 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 ROBO3Q96MS0 1386 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 PATL2C9JE40 543 aaKnown RBP22.98■■□□□ 1.27
SRSF4-206ENST00000605204 M0R2C6 588 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 CYP2D6P10635 497 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 TDO2P48775 406 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 RAB3GAP1Q15042 981 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 ARMC5Q96C12 935 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 FEZ1Q99689 392 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 EFCC1Q9HA90 598 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 HELLSQ9NRZ9 838 aa22.98■■□□□ 1.27
SRSF4-206ENST00000605204 TRIM6-TRIM34B2RNG4 842 aa22.97■■□□□ 1.27
SRSF4-206ENST00000605204 APPP05067 770 aa22.97■■□□□ 1.27
SRSF4-206ENST00000605204 OSBPP22059 807 aa22.97■■□□□ 1.27
SRSF4-206ENST00000605204 LACTBP83111 547 aaPredicted RBP22.97■■□□□ 1.27
SRSF4-206ENST00000605204 USP17L2Q6R6M4 530 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms