RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 PREPLQ4J6C6 727 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 ACBD5Q5T8D3 534 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 RNF135Q8IUD6 432 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 SLC39A13Q96H72 371 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 TRIM4Q9C037 500 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 TAGLN3Q9UI15 199 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 PZPP20742 1482 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 EFCAB6Q5THR3 1501 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 RPS6KA3P51812 740 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 IMMTQ16891 758 aaKnown RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 MAP7D1Q3KQU3 841 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 TAS1R3Q7RTX0 852 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 RNF168Q8IYW5 571 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 FAM9CQ8IZT9 166 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 KIAA1958Q8N8K9 716 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 GBP7Q8N8V2 638 aaPredicted RBP8.11□□□□□ -1.11
TUBE1-207ENST00000604689 NUP133Q8WUM0 1156 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 DIP2CQ9Y2E4 1556 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 KIAA1210Q9ULL0 1709 aa8.11□□□□□ -1.11
TUBE1-207ENST00000604689 hCG_1984214I3L0E3 225 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 BNIP1Q12981 228 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 MPP3Q13368 585 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 HS1BP3Q53T59 392 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 IL31Q6EBC2 164 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 ARMC2Q8NEN0 867 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 MYRIPQ8NFW9 859 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 CEP63Q96MT8 703 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 GINM1Q9NU53 330 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 NKTRP30414 1462 aaKnown RBP8.1□□□□□ -1.11
TUBE1-207ENST00000604689 NUP155O75694 1391 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 SOCS7O14512 581 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 LSM1O15116 133 aaKnown RBP8.1□□□□□ -1.11
TUBE1-207ENST00000604689 RARSP54136 660 aaKnown RBP8.1□□□□□ -1.11
TUBE1-207ENST00000604689 SERINC3Q13530 473 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 SIM2Q14190 667 aaPredicted RBP8.1□□□□□ -1.11
TUBE1-207ENST00000604689 IQCB1Q15051 598 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 VPS37DQ86XT2 251 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 GPT2Q8TD30 523 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 TRIM7Q9C029 511 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 BRINP2Q9C0B6 783 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 AVENQ9NQS1 362 aaPredicted RBP8.1□□□□□ -1.11
TUBE1-207ENST00000604689 ATP8A1Q9Y2Q0 1164 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 FRMD3A2A2Y4 597 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 PTPN14Q15678 1187 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 PLEKHG4Q58EX7 1191 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 RNF20Q5VTR2 975 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 SYT10Q6XYQ8 523 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 NCAPG2Q86XI2 1143 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 ZGPATQ8N5A5 531 aaKnown RBP8.1□□□□□ -1.11
TUBE1-207ENST00000604689 ZBTB10Q96DT7 871 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 TESK2Q96S53 571 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 JADE2Q9NQC1 790 aa8.1□□□□□ -1.11
TUBE1-207ENST00000604689 NWD1Q149M9 1564 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ABCC5O15440 1437 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 MBD5Q9P267 1494 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 RASA4BC9J798 803 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 SNUPNO95149 360 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 COL9A1P20849 921 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 FMR1Q06787 632 aaKnown RBP eCLIP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ITPRIPQ8IWB1 547 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 GSDMBQ8TAX9 411 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ZMAT2Q96NC0 199 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 BAG1Q99933 345 aaPredicted RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 CD2APQ9Y5K6 639 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 VIRMAQ69YN4 1812 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 F8W031 263 aaPredicted RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 IFRD1O00458 451 aaPredicted RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 RNASEH2AO75792 299 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 IL33O95760 270 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 MYCP01106 439 aaPredicted RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 HSPA1AP0DMV8 641 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 HSPA1BP0DMV9 641 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 SCG2P13521 617 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 CLK1P49759 484 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 NEK3P51956 506 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ADCY1Q08828 1119 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 MTMR2Q13614 643 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 SEPT6Q14141 434 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 TRMT2AQ8IZ69 625 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ZNF713Q8N859 430 aaPredicted RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ATP6V1E2Q96A05 226 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 LRRCC1Q9C099 1032 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 SAP130Q9H0E3 1048 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 BCL2L12Q9HB09 334 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 METTL5Q9NRN9 209 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 DNAAF2Q9NVR5 837 aaKnown RBP8.09□□□□□ -1.11
TUBE1-207ENST00000604689 KIAA1468Q9P260 1216 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 MAFFQ9ULX9 164 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ARPC4-TTLL3A0A0A6YYG9 625 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 SPTLC2O15270 562 aa8.09□□□□□ -1.11
TUBE1-207ENST00000604689 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms