RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 USP8P40818 1118 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 MTHFSDQ2M296 383 aaKnown RBP7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 CCDC116Q8IYX3 515 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 FMR1NBQ8N0W7 255 aaPredicted RBP7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 CEP112Q8N8E3 955 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 FAM71BQ8TC56 605 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 TRIM47Q96LD4 638 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 KCTD15Q96SI1 283 aaPredicted RBP7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 HDAC5Q9UQL6 1122 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 MAP4K5Q9Y4K4 846 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 NALCNQ8IZF0 1738 aa7.38□□□□□ -1.23
SRGAP2-211ENST00000604423 MED23Q9ULK4 1368 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 MAP3K19Q56UN5 1328 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 A0A0D9SFI3 127 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 PTPDC1A2A3K4 754 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 IKBKBO14920 756 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 CLGNO14967 610 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 CORO7P57737 925 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 TUBB4BP68371 445 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 C6orf118Q5T5N4 469 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 ADALQ6DHV7 355 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 OLFM4Q6UX06 510 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 PDILTQ8N807 584 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 KCNG4Q8TDN1 519 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 DHX58Q96C10 678 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 NUDT16Q96DE0 195 aaKnown RBP7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 BAG1Q99933 345 aaPredicted RBP7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 FAN1Q9Y2M0 1017 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 A0A1W2PQ27 194 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 A0A1W2PQ64 194 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 A0A1W2PQD8 194 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 MAP2K7O14733 419 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 MYO1BO43795 1136 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 NBPF7P0C2Y1 421 aaPredicted RBP7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 NDUFA8P51970 172 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 SETQ01105 290 aaPredicted RBP7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 MYL5Q02045 173 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 SCRN1Q12765 414 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 MCTP2Q6DN12 878 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 MMS22LQ6ZRQ5 1243 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 SRGAP1Q7Z6B7 1085 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 VSTM4Q8IW00 320 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 SUGP1Q8IWZ8 645 aaKnown RBP7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 HNRNPLLQ8WVV9 542 aaKnown RBP7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 DNAAF4Q8WXU2 420 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 ZSWIM4Q9H7M6 989 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 SENP2Q9HC62 589 aa7.37□□□□□ -1.23
SRGAP2-211ENST00000604423 ADD1P35611 737 aaKnown RBP7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 MMP14P50281 582 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 EIF5P55010 431 aaKnown RBP7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 SART3Q15020 963 aaKnown RBP7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 TSGA10IPQ3SY00 556 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 HSP90AB2PQ58FF8 381 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 TADA2BQ86TJ2 420 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 DZIP3Q86Y13 1208 aaKnown RBP7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 MICALL1Q8N3F8 863 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 MSL3Q8N5Y2 521 aaKnown RBP7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 CNNM3Q8NE01 707 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 NSUN7Q8NE18 718 aaKnown RBP7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 ANKRD20A12PQ8NF67 263 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 WDR24Q96S15 920 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 MED4Q9NPJ6 270 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 PCDHA7Q9UN72 937 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 LAMA4Q16363 1823 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 JCADQ9P266 1359 aa7.36□□□□□ -1.23
SRGAP2-211ENST00000604423 SOBPA7XYQ1 873 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 FANCGO15287 622 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 KIF5CO60282 957 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 PFKFB2O60825 505 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 WDHD1O75717 1129 aaPredicted RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 CPP00450 1065 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 HMGB1P09429 215 aaKnown RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 CCDC175P0C221 793 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 ATP1A3P13637 1013 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 GUCY1B3Q02153 619 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 MLECQ14165 292 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 DNAJC21Q5F1R6 531 aaKnown RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 PPP1R26Q5T8A7 1209 aaPredicted RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 AFAP1L1Q8TED9 768 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 BOLA2Q9H3K6 86 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 BICC1Q9H694 974 aaKnown RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 PHAXQ9H814 394 aaKnown RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 C9orf78Q9NZ63 289 aaPredicted RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 PUF60Q9UHX1 559 aaKnown RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 OVOS2A0A0J9YW53 1432 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 OVOS2Q6IE36 1432 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 A0A087WUV0 522 aaPredicted RBP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 STX10O60499 249 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 PPFIA4O75335 1185 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 ALDH1L1O75891 902 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 TUBBP07437 444 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 FBXO45P0C2W1 286 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 CCDC172P0C7W6 258 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 USP5P45974 858 aa7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 G3BP1Q13283 466 aaKnown RBP eCLIP7.35□□□□□ -1.23
SRGAP2-211ENST00000604423 COL9A3Q14050 684 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms