RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 FAM200AQ8TCP9 573 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 ERCC4Q92889 916 aaPredicted RBP17.43■□□□□ 0.38
CCDC12-211ENST00000604367 RTFDC1Q9BY42 306 aaPredicted RBP17.43■□□□□ 0.38
CCDC12-211ENST00000604367 SAP30BPQ9UHR5 308 aaKnown RBP17.43■□□□□ 0.38
CCDC12-211ENST00000604367 MROH7-TTC4A0A0A0MT08 1334 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 LAMB1P07942 1786 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 SRGNP10124 158 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 LUZP1Q86V48 1076 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 SP8Q8IXZ3 490 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 PKNOX2Q96KN3 472 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 KIAA1551Q9HCM1 1747 aa17.43■□□□□ 0.38
CCDC12-211ENST00000604367 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
CCDC12-211ENST00000604367 SLC39A14Q15043 492 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 MPNDQ8N594 471 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 A0A1W2PQ27 194 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 A0A1W2PQ64 194 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 A0A1W2PQD8 194 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 WDHD1O75717 1129 aaPredicted RBP17.42■□□□□ 0.38
CCDC12-211ENST00000604367 PPP4CP60510 307 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 GTF2IP78347 998 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 TFAP4Q01664 338 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 RNF26Q9BY78 433 aaPredicted RBP17.42■□□□□ 0.38
CCDC12-211ENST00000604367 DNAJC25Q9H1X3 360 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
CCDC12-211ENST00000604367 ATP6V0A2Q9Y487 856 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
CCDC12-211ENST00000604367 PTMAP06454 111 aaKnown RBP17.41■□□□□ 0.38
CCDC12-211ENST00000604367 PLCD1P51178 756 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 NR5A1Q13285 461 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 ZSCAN30Q86W11 494 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 NOSTRINQ8IVI9 506 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 AMOTL1Q8IY63 956 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 FMR1NBQ8N0W7 255 aaPredicted RBP17.41■□□□□ 0.38
CCDC12-211ENST00000604367 MKNK2Q9HBH9 465 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 VPS54Q9P1Q0 977 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
CCDC12-211ENST00000604367 A0A087WWV3 80 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 RXRBP28702 533 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 AXDND1Q5T1B0 1012 aaPredicted RBP17.41■□□□□ 0.38
CCDC12-211ENST00000604367 SLC44A5Q8NCS7 719 aa17.41■□□□□ 0.38
CCDC12-211ENST00000604367 CTAGE5O15320 804 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 AP5Z1O43299 807 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 MAP3K14Q99558 947 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 SDF4Q9BRK5 362 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 CBX8Q9HC52 389 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 PARP3Q9Y6F1 533 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 BAZ2BQ9UIF8 2168 aaKnown RBP17.4■□□□□ 0.38
CCDC12-211ENST00000604367 MYH6P13533 1939 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 DDAH1O94760 285 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 CALM1P0DP23 149 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 CALM2P0DP24 149 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 CALM3P0DP25 149 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 FUT2Q10981 343 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 PTPAQ15257 358 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-211ENST00000604367 OXER1Q8TDS5 423 aa17.4■□□□□ 0.38
CCDC12-211ENST00000604367 RBM28Q9NW13 759 aaKnown RBP17.4■□□□□ 0.38
CCDC12-211ENST00000604367 F8W031 263 aaPredicted RBP17.39■□□□□ 0.37
CCDC12-211ENST00000604367 IGSF3O75054 1194 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 NPR1P16066 1061 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 MSNP26038 577 aaKnown RBP17.39■□□□□ 0.37
CCDC12-211ENST00000604367 CLCN1P35523 988 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 ZNF165P49910 485 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 PKN1Q16512 942 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 RCSD1Q6JBY9 416 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 TEX11Q8IYF3 940 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 PIBF1Q8WXW3 757 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 SHISA4Q96DD7 197 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 ZC3H12CQ9C0D7 883 aaKnown RBP17.39■□□□□ 0.37
CCDC12-211ENST00000604367 IL17RBQ9NRM6 502 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 GPR75-ASB3A0A0A6YYF3 556 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 ATP2B1P20020 1258 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 HS1BP3Q53T59 392 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 TBC1D22AQ8WUA7 517 aa17.39■□□□□ 0.37
CCDC12-211ENST00000604367 USP17L3A6NCW0 530 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 USP17L4A6NCW7 530 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 TSPY3P0CV98 308 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 TSPY8P0CW00 308 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 PDE6BP35913 854 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-211ENST00000604367 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 TMTC3Q6ZXV5 915 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 USP17L1Q7RTZ2 530 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 FLAD1Q8NFF5 587 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■■□□□ 13.5
CCDC12-211ENST00000604367 CLIC6Q96NY7 704 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 FOXP1Q9H334 677 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-211ENST00000604367 CCDC39Q9UFE4 941 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 PRPF3O43395 683 aaKnown RBP17.38■□□□□ 0.37
CCDC12-211ENST00000604367 PFKFB1P16118 471 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 ALDH1B1P30837 517 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 DPP8Q6V1X1 898 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-211ENST00000604367 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-211ENST00000604367 SRBD1Q8N5C6 995 aaKnown RBP17.38■□□□□ 0.37
CCDC12-211ENST00000604367 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 KAT14Q9H8E8 782 aa17.38■□□□□ 0.37
CCDC12-211ENST00000604367 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms