RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PLEKHH3Q7Z736 793 aa14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 PRKAG2Q9UGJ0 569 aa14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 CACNA1FO60840 1977 aa14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 PRUNE2Q8WUY3 3088 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 TIMM10P62072 90 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 GSTO1P78417 241 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 JAG1P78504 1218 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 Q3C1V9 767 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 TEX11Q8IYF3 940 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 SSH1Q8WYL5 1049 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 LOC285556D6RIA3 1793 aa14.57□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 ASNSP08243 561 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 RTP1P59025 263 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MAP2K5Q13163 448 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MVPQ14764 893 aaKnown RBP14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 SHROOM1Q2M3G4 852 aaPredicted RBP14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 C9orf50Q5SZB4 431 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MFSD14CQ5VZR4 134 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 POTEEQ6S8J3 1075 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 PI16Q6UXB8 463 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 TBC1D9Q6ZT07 1266 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MYLIPQ8WY64 445 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 NSUN4Q96CB9 384 aaKnown RBP14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 XAGE2Q96GT9 111 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 SEMA6BQ9H3T3 888 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 FLRT1Q9NZU1 646 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 RAI14Q9P0K7 980 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 NDUFB9Q9Y6M9 179 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 AK9Q5TCS8 1911 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
PDLIM1P1-201ENST00000604187 PHIPQ8WWQ0 1821 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 PTPRFP10586 1907 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 A0A1B0GUL7 405 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 C19orf81C9J6K1 198 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 GDF11O95390 407 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 LDHCP07864 332 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 CNGA1P29973 690 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 SHHQ15465 462 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 GTF3C2Q8WUA4 911 aaPredicted RBP14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 TTYH1Q9H313 450 aaPredicted RBP14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 DNAJC18Q9H819 358 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 HMG20BQ9P0W2 317 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 PI4KBQ9UBF8 816 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 ATP11BQ9Y2G3 1177 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 CDH23Q9H251 3354 aa14.55□□□□□ -0.08
PDLIM1P1-201ENST00000604187 USP17L10C9JJH3 530 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 DNM1LO00429 736 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 FOSL2P15408 326 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 WDR78Q5VTH9 848 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 SPATA5Q8NB90 893 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 LPAR1Q92633 364 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 EDC3Q96F86 508 aaKnown RBP14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 COPRSQ9NQ92 184 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 PRDM5Q9NQX1 630 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 ZBTB21Q9ULJ3 1066 aa14.54□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MSCO60682 206 aa14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 TFCP2Q12800 502 aa14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 CRACR2BQ8N4Y2 399 aaPredicted RBP14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 TRIM34Q9BYJ4 488 aa14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 DHX36Q9H2U1 1008 aaKnown RBP14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 EMILIN3Q9NT22 766 aa14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MUC3AQ02505 3323 aa14.53□□□□□ -0.08
PDLIM1P1-201ENST00000604187 CNMDO75829 334 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 CYP2C19P33261 490 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 CCNA1P78396 465 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SMAD3P84022 425 aaKnown RBP14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ATP2B2Q01814 1243 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 MAPKAPK5Q8IW41 473 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SYMPKQ92797 1274 aaKnown RBP14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 BADQ92934 168 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 NOL10Q9BSC4 688 aaKnown RBP14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 AKAP2Q9Y2D5 859 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 RABGAP1Q9Y3P9 1069 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 PLXNB2O15031 1838 aa14.52□□□□□ -0.09
PDLIM1P1-201ENST00000604187 DOCK3Q8IZD9 2030 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ZNF521Q96K83 1311 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 SLC15A5A6NIM6 579 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 ZYXQ15942 572 aaKnown RBP14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 GJC2Q5T442 439 aaPredicted RBP14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 GORABQ5T7V8 394 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 USP17L2Q6R6M4 530 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TRPV1Q8NER1 839 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 NEUROD6Q96NK8 337 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 FEZ1Q99689 392 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 LRP2BPQ9P2M1 347 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 MYH13Q9UKX3 1938 aa14.51□□□□□ -0.09
PDLIM1P1-201ENST00000604187 FLT1P17948 1338 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 HOXC6P09630 235 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 COL9A1P20849 921 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 PTPREP23469 700 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TRIM60Q495X7 471 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 TGFBRAP1Q8WUH2 860 aa14.5□□□□□ -0.09
PDLIM1P1-201ENST00000604187 PDLIM7Q9NR12 457 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms