RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 TATDN2Q93075 761 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 MORF4L1Q9UBU8 362 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 PRKAB1Q9Y478 270 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 DOCK5Q9H7D0 1870 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 FMNL1O95466 1100 aaPredicted RBP3.63□□□□□ -1.83
VCAM1-205ENST00000603679 XRCC5P13010 732 aaKnown RBP3.63□□□□□ -1.83
VCAM1-205ENST00000603679 TAF7Q15545 349 aaPredicted RBP3.63□□□□□ -1.83
VCAM1-205ENST00000603679 SAMD7Q7Z3H4 446 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 CCAR1Q8IX12 1150 aaKnown RBP3.63□□□□□ -1.83
VCAM1-205ENST00000603679 ZNF654Q8IZM8 581 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 PLBD2Q8NHP8 589 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.63□□□□□ -1.83
VCAM1-205ENST00000603679 TSC1Q92574 1164 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 SYMPKQ92797 1274 aaKnown RBP3.63□□□□□ -1.83
VCAM1-205ENST00000603679 GPATCH3Q96I76 525 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 COA1Q9GZY4 146 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 PRDM16Q9HAZ2 1276 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 FKBPLQ9UIM3 349 aa3.63□□□□□ -1.83
VCAM1-205ENST00000603679 C6orf229H3BNL8 230 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 SORBS3O60504 671 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 SUSD4Q5VX71 490 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 NUDT18Q6ZVK8 323 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 TBC1D16Q8TBP0 767 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 BSDC1Q9NW68 430 aaPredicted RBP3.62□□□□□ -1.83
VCAM1-205ENST00000603679 XDHP47989 1333 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 NDUFB5O43674 189 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 CELF2O95319 508 aaKnown RBP3.62□□□□□ -1.83
VCAM1-205ENST00000603679 ZNF211Q13398 564 aaPredicted RBP3.62□□□□□ -1.83
VCAM1-205ENST00000603679 DSC3Q14574 896 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 WDR78Q5VTH9 848 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 WDR63Q8IWG1 891 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 MRFAP1L1Q96HT8 127 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 UBA5Q9GZZ9 404 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 ZSWIM4Q9H7M6 989 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 TYW1Q9NV66 732 aaKnown RBP3.62□□□□□ -1.83
VCAM1-205ENST00000603679 TNNT2P45379 298 aaPredicted RBP3.62□□□□□ -1.83
VCAM1-205ENST00000603679 CAP1Q01518 475 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 TCEAL1Q15170 157 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 TRAF7Q6Q0C0 670 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 RETREG3Q86VR2 466 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 JDP2Q8WYK2 163 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 ALKBH8Q96BT7 664 aaKnown RBP3.62□□□□□ -1.83
VCAM1-205ENST00000603679 PIF1Q9H611 641 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 IFT57Q9NWB7 429 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 MTMR10Q9NXD2 777 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 FAM198AQ9UFP1 575 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 PARP2Q9UGN5 583 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 CNOT7Q9UIV1 285 aaKnown RBP3.62□□□□□ -1.83
VCAM1-205ENST00000603679 TNKSO95271 1327 aa3.62□□□□□ -1.83
VCAM1-205ENST00000603679 STK10O94804 968 aaKnown RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 CREBRFQ8IUR6 639 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 ARMC2Q8NEN0 867 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 HELQQ8TDG4 1101 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 SECISBP2LQ93073 1101 aaKnown RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 DNMT3AQ9Y6K1 912 aaPredicted RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 DIAPH1O60610 1272 aaKnown RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 ATP2B2Q01814 1243 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 PTK2Q05397 1052 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 KIF4BQ2VIQ3 1234 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 DEPDC4Q8N2C3 294 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 HOOK2Q96ED9 719 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 FAM163AQ96GL9 167 aaPredicted RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 ZNF277Q9NRM2 450 aaPredicted RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 PNMA3Q9UL41 463 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 RPTORQ8N122 1335 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 PPP1R12AO14974 1030 aaPredicted RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 PRMT3O60678 531 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 LDHBP07195 334 aaKnown RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 HOXC6P09630 235 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 CT47B1P0C2W7 299 aaPredicted RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 SLC4A3P48751 1232 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 PTPN12Q05209 780 aaKnown RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 HLFQ16534 295 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 Q3C1V9 767 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 ALKBH2Q6NS38 261 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 C3orf67Q6ZVT6 689 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 TMC7Q7Z402 723 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 STK11IPQ8N1F8 1099 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 ZBTB38Q8NAP3 1195 aaPredicted RBP3.61□□□□□ -1.83
VCAM1-205ENST00000603679 IL17RAQ96F46 866 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 ZIC5Q96T25 663 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 MYOZ2Q9NPC6 264 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 POLLQ9UGP5 575 aa3.61□□□□□ -1.83
VCAM1-205ENST00000603679 SPTBN5Q9NRC6 3674 aaKnown RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PSMD14O00487 310 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 CLDN10P78369 228 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 FOXK2Q01167 660 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PPATQ06203 517 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PSMD2Q13200 908 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 CCDC184Q52MB2 194 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 RNF20Q5VTR2 975 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 MAP1SQ66K74 1059 aaPredicted RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 ALG1LQ6GMV1 187 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 CCDC191Q8NCU4 936 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 RELTQ969Z4 430 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 UTP14AQ9BVJ6 771 aaKnown RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 PNNQ9H307 717 aaKnown RBP3.6□□□□□ -1.83
VCAM1-205ENST00000603679 SALL3Q9BXA9 1300 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 CCDC194A0A1B0GVG4 234 aa3.6□□□□□ -1.83
VCAM1-205ENST00000603679 TLR2O60603 784 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms