RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GPATCH4Q5T3I0 446 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 PRPF38BQ5VTL8 546 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 ARHGEF25Q86VW2 580 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 PLPP7Q8NBV4 271 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM200AQ8TCP9 573 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 STON2Q8WXE9 905 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 SRA1Q9HD15 236 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 CYLDQ9NQC7 956 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 GINM1Q9NU53 330 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 PPP1R9AQ9ULJ8 1098 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 GTF2A1LQ9UNN4 478 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 FCF1Q9Y324 198 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 UNC13BO14795 1591 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 SYNDIG1LA6NDD5 238 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 ZPR1O75312 459 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 TPM3P06753 285 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 SKILP12757 684 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 MZF1P28698 734 aaPredicted RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 MCM4P33991 863 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 CASP2P42575 452 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 PPP4R3AQ6IN85 833 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 KCT2Q8NC54 265 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 APPBP2Q92624 585 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 TRMT2BQ96GJ1 504 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 PURBQ96QR8 312 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 PRKRIP1Q9H875 184 aaPredicted RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 METTL5Q9NRN9 209 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 RRP15Q9Y3B9 282 aaKnown RBP5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 SNX5Q9Y5X3 404 aa5.81□□□□□ -1.48
SPTBN1-206ENST00000602898 CCDC175P0C221 793 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 EPHB1P54762 984 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 NCOA4Q13772 614 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 TSGA10IPQ3SY00 556 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 TJAP1Q5JTD0 557 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 SOGA3Q5TF21 947 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM180BQ6P0A1 224 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 ANKS3Q6ZW76 656 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 TMC4Q7Z404 712 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 PNMA8AQ86V59 439 aaPredicted RBP5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 IQCF2Q8IXL9 164 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 ERCC4Q92889 916 aaPredicted RBP5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 TRIM55Q9BYV6 548 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 ANTXR1Q9H6X2 564 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 LRRC7Q96NW7 1537 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM196BA6NMK8 535 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 H0YHG0 523 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 XBP1P17861 261 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 CD151P48509 253 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 INHBEP58166 350 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 SARNPP82979 210 aaKnown RBP5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 CCDC15Q0P6D6 951 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 SLMAPQ14BN4 828 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 AGAP9Q5VTM2 703 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM47EQ6ZV65 393 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 TNPO1Q92973 898 aaKnown RBP5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 NUDT12Q9BQG2 462 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 TRIM6Q9C030 488 aaPredicted RBP5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 COMMD8Q9NX08 183 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 ZKSCAN5Q9Y2L8 839 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 DDX49Q9Y6V7 483 aaKnown RBP5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 AHDC1Q5TGY3 1603 aaPredicted RBP5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 NCOA2Q15596 1464 aa5.8□□□□□ -1.48
SPTBN1-206ENST00000602898 TOM1O60784 492 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 HSP90AB1P08238 724 aaKnown RBP5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 HSPA5P11021 654 aaKnown RBP5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 SFSWAPQ12872 951 aaKnown RBP5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 EXOC6Q8TAG9 804 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 RELTQ969Z4 430 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 MAP3K14Q99558 947 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 OCSTAMPQ9BR26 566 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 ASPSCR1Q9BZE9 553 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 PANK3Q9H999 370 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 CEP72Q9P209 647 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 ITM2BQ9Y287 266 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 IRS4O14654 1257 aaPredicted RBP5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 SKIP12755 728 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 GYS1P13807 737 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 ABCD1P33897 745 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 RBM5P52756 815 aaKnown RBP eCLIP5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 TSHZ3Q63HK5 1081 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 XRRA1Q6P2D8 792 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 CATIPQ7Z7H3 387 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 ANKRD7Q92527 254 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 TEX13AQ9BXU3 409 aaPredicted RBP5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 NCOA3Q9Y6Q9 1424 aa5.79□□□□□ -1.48
SPTBN1-206ENST00000602898 BAIAP3O94812 1187 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 SLC4A1P02730 911 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 KIAA2012Q0VF49 1180 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 NR1H3Q13133 447 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 TRIM14Q14142 442 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 NAA30Q147X3 362 aaPredicted RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 PUM3Q15397 648 aaKnown RBP5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 PTPN14Q15678 1187 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 OCLNQ16625 522 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 HYIQ5T013 277 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 RTL10Q7L3V2 364 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 GOLGA6L1Q8N7Z2 621 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 FAM184AQ8NB25 1140 aa5.78□□□□□ -1.48
SPTBN1-206ENST00000602898 FNIP2Q9P278 1114 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms