RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 LAMB4A4D0S4 1761 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 A0A0D9SFI3 127 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 MAGEB6P1A0A0J9YX57 407 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 SRGNP10124 158 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
HCG18-248ENST00000602861 AGERQ15109 404 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 CWF19L2Q2TBE0 894 aaKnown RBP9.37□□□□□ -0.91
HCG18-248ENST00000602861 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 SOGA3Q5TF21 947 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 NBPF5PQ86XG9 351 aaPredicted RBP9.37□□□□□ -0.91
HCG18-248ENST00000602861 TNS4Q8IZW8 715 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 C17orf53Q8N3J3 647 aaPredicted RBP9.37□□□□□ -0.91
HCG18-248ENST00000602861 LINS1Q8NG48 757 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 KIAA1524Q8TCG1 905 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 C9orf78Q9NZ63 289 aaPredicted RBP9.37□□□□□ -0.91
HCG18-248ENST00000602861 ZMIZ1Q9ULJ6 1067 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 HDAC5Q9UQL6 1122 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 ZNF652Q9Y2D9 606 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 BCORQ6W2J9 1755 aa9.37□□□□□ -0.91
HCG18-248ENST00000602861 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 VPS37CA5D8V6 355 aaPredicted RBP9.36□□□□□ -0.91
HCG18-248ENST00000602861 FAM196BA6NMK8 535 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 POTECB2RU33 542 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L15C9J2P7 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L10C9JJH3 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L13C9JLJ4 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L12C9JPN9 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L11C9JVI0 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L21D6R901 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L18D6R9N7 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L22D6RA61 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L17D6RBQ6 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L19D6RCP7 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L20D6RJB6 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 GRM8O00222 908 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 TPM3P06753 285 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 HSPA1AP0DMV8 641 aaKnown RBP9.36□□□□□ -0.91
HCG18-248ENST00000602861 HSPA1BP0DMV9 641 aaKnown RBP9.36□□□□□ -0.91
HCG18-248ENST00000602861 LIG1P18858 919 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 RPS6KB1P23443 525 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 PSMA5P28066 241 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 KRT85P78386 507 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP17L24Q0WX57 530 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 MAP7D1Q3KQU3 841 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 TMEM164Q5U3C3 297 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 LARP1BQ659C4 914 aaKnown RBP9.36□□□□□ -0.91
HCG18-248ENST00000602861 RBM43Q6ZSC3 357 aaKnown RBP9.36□□□□□ -0.91
HCG18-248ENST00000602861 CDC37L1Q7L3B6 337 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 BAP1Q92560 729 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 MASTLQ96GX5 879 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 BICC1Q9H694 974 aaKnown RBP9.36□□□□□ -0.91
HCG18-248ENST00000602861 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
HCG18-248ENST00000602861 PYCARDQ9ULZ3 195 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 USP16Q9Y5T5 823 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 TAF6LQ9Y6J9 622 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
HCG18-248ENST00000602861 DDNO94850 711 aaPredicted RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 S1PR4O95977 384 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 IGKV5-2P06315 115 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 SNRPA1P09661 255 aaKnown RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 CCDC192P0DO97 292 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 ZKSCAN1P17029 563 aaPredicted RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 RASA1P20936 1047 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 TYRO3Q06418 890 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 G3BP1Q13283 466 aaKnown RBP eCLIP9.35□□□□□ -0.91
HCG18-248ENST00000602861 EML3Q32P44 896 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 CRTC2Q53ET0 693 aaPredicted RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 CCDC93Q567U6 631 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 DDX60Q8IY21 1712 aaKnown RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 STK32AQ8WU08 396 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 PKNOX2Q96KN3 472 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 CCDC8Q9H0W5 538 aaPredicted RBP9.35□□□□□ -0.91
HCG18-248ENST00000602861 NUP62CLQ9H1M0 184 aa9.35□□□□□ -0.91
HCG18-248ENST00000602861 DDX21Q9NR30 783 aaKnown RBP eCLIP9.35□□□□□ -0.91
HCG18-248ENST00000602861 FAM177BA6PVY3 158 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 TAF5LO75529 589 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 NPR1P16066 1061 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 PDCP20941 246 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 RFX5P48382 616 aaPredicted RBP9.34□□□□□ -0.91
HCG18-248ENST00000602861 RESTQ13127 1097 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 ANKRD1Q15327 319 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 LINC01559Q495D7 138 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 FAM173BQ6P4H8 233 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 TRAF7Q6Q0C0 670 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 BLOC1S2Q6QNY1 142 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 CLEC4GQ6UXB4 293 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 LEO1Q8WVC0 666 aaPredicted RBP9.34□□□□□ -0.91
HCG18-248ENST00000602861 CLSTN2Q9H4D0 955 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 HMG20BQ9P0W2 317 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 NIP7Q9Y221 180 aaKnown RBP eCLIP9.34□□□□□ -0.91
HCG18-248ENST00000602861 FCF1Q9Y324 198 aaKnown RBP9.34□□□□□ -0.91
HCG18-248ENST00000602861 IVNS1ABPQ9Y6Y0 642 aa9.34□□□□□ -0.91
HCG18-248ENST00000602861 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms